RNA–Protein interactions for RNA: ENST00000431640.5

DDX56-204, Transcript of DEAD-box helicase 56, humanhuman

TSL 1 (best) BASIC

Gene DDX56, Length 1,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-204ENST00000431640 PLCG2P16885 1265 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 KIF5BP33176 963 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 ZNF75DP51815 510 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 TERF1P54274 439 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 STRIP1Q5VSL9 837 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 USP17L1Q7RTZ2 530 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 CCDC82Q8N4S0 544 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 ZNF579Q8NAF0 562 aaKnown RBP14.74□□□□□ -0.05
DDX56-204ENST00000431640 FAM13BQ9NYF5 915 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 KCNJ14Q9UNX9 436 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 PCDHAC2Q9Y5I4 1007 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 LAMB1P07942 1786 aa14.74□□□□□ -0.05
DDX56-204ENST00000431640 SMTNL1A8MU46 457 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 G3V3G9 751 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 BMP15O95972 392 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 KRT2P35908 639 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 NLRP12P59046 1061 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 CXCL9Q07325 125 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 FUT2Q10981 343 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 DCAF8Q5TAQ9 597 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 TMTC3Q6ZXV5 915 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 NAP1L5Q96NT1 182 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 GMLQ99445 158 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 TCP11L1Q9NUJ3 509 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 ZBTB12Q9Y330 459 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 V9GY48 417 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 MROH7-TTC4A0A0A0MT08 1334 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 SHTN1A0MZ66 631 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 F8W031 263 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 FZD9O00144 591 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 TPM4P67936 248 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 PKN1Q16512 942 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 SHC4Q6S5L8 630 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 DRC7Q8IY82 874 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 ZNF444Q8N0Y2 327 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 CMTR1Q8N1G2 835 aaKnown RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 PIBF1Q8WXW3 757 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 FAM163AQ96GL9 167 aaPredicted RBP14.73□□□□□ -0.05
DDX56-204ENST00000431640 PHF20Q9BVI0 1012 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 MKNK2Q9HBH9 465 aa14.73□□□□□ -0.05
DDX56-204ENST00000431640 FOCADQ5VW36 1801 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 ROBO3Q96MS0 1386 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 MYH6P13533 1939 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 SMIM22K7EJ46 135 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 VIL1P09327 827 aaKnown RBP14.72□□□□□ -0.05
DDX56-204ENST00000431640 USP17L8P0C7I0 530 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 LMNB1P20700 586 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 PTPREP23469 700 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 GNAQP50148 359 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 TOB1P50616 345 aaPredicted RBP14.72□□□□□ -0.05
DDX56-204ENST00000431640 SCNN1DP51172 638 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 FAM47AQ5JRC9 791 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 C11orf57Q6ZUT1 292 aaPredicted RBP14.72□□□□□ -0.05
DDX56-204ENST00000431640 KIAA0825Q8IV33 1275 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 SH3RF3Q8TEJ3 882 aaPredicted RBP14.72□□□□□ -0.05
DDX56-204ENST00000431640 MRFAP1L1Q96HT8 127 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 KAT14Q9H8E8 782 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 TAOK2Q9UL54 1235 aa14.72□□□□□ -0.05
DDX56-204ENST00000431640 GPR75-ASB3A0A0A6YYF3 556 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 UBE2Q2LH0YL09 131 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 CYP2D6P10635 497 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 FKBP1AP62942 108 aaKnown RBP14.71□□□□□ -0.05
DDX56-204ENST00000431640 TFAP4Q01664 338 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 GPR162Q16538 588 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 KANK3Q6NY19 840 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 RSBN1LQ6PCB5 846 aaPredicted RBP14.71□□□□□ -0.05
DDX56-204ENST00000431640 DHX40Q8IX18 779 aaKnown RBP14.71□□□□□ -0.05
DDX56-204ENST00000431640 CCDC34Q96HJ3 373 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 CABP5Q9NP86 173 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 TUBE1Q9UJT0 475 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 KCNH3Q9ULD8 1083 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 SUGT1Q9Y2Z0 365 aa14.71□□□□□ -0.05
DDX56-204ENST00000431640 SRPRBQ9Y5M8 271 aaKnown RBP14.71□□□□□ -0.05
DDX56-204ENST00000431640 GAKO14976 1311 aa14.71□□□□□ -0.06
DDX56-204ENST00000431640 SPC24Q8NBT2 197 aa14.7□□□□□ -0.06
DDX56-204ENST00000431640 TTC12Q9H892 705 aaPredicted RBP14.7□□□□□ -0.06
DDX56-204ENST00000431640 RNF181Q9P0P0 153 aa14.7□□□□□ -0.06
DDX56-204ENST00000431640 TTF2Q9UNY4 1162 aaKnown RBP14.7□□□□□ -0.06
DDX56-204ENST00000431640 DAGLAQ9Y4D2 1042 aa14.7□□□□□ -0.06
DDX56-204ENST00000431640 NAV1Q8NEY1 1877 aa14.7□□□□□ -0.06
DDX56-204ENST00000431640 TRIM75PA6NK02 468 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 PLEKHA8P1O95397 391 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 NR5A1Q13285 461 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 NOLC1Q14978 699 aaKnown RBP eCLIP14.69□□□□□ -0.06
DDX56-204ENST00000431640 KRBA2Q6ZNG9 492 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 FAM177A1Q8N128 213 aaPredicted RBP14.69□□□□□ -0.06
DDX56-204ENST00000431640 CNNM3Q8NE01 707 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 TGFBRAP1Q8WUH2 860 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 JDP2Q8WYK2 163 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 ZNF830Q96NB3 372 aaPredicted RBP14.69□□□□□ -0.06
DDX56-204ENST00000431640 LZTS2Q9BRK4 669 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 SH3GLB2Q9NR46 395 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 VPS54Q9P1Q0 977 aa14.69□□□□□ -0.06
DDX56-204ENST00000431640 FBXO2Q9UK22 296 aaPredicted RBP14.69□□□□□ -0.06
DDX56-204ENST00000431640 NEMFO60524 1076 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 TSPY3P0CV98 308 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 TSPY8P0CW00 308 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 SCG2P13521 617 aa14.68□□□□□ -0.06
DDX56-204ENST00000431640 CALML3P27482 149 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms