RNA–Protein interactions for RNA: ENST00000431461.1

CDC40-204, Transcript of cell division cycle 40, humanhuman

TSL 3

Gene CDC40, Length 400 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-204ENST00000431461 SRRDQ9UH36 339 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 IRAK3Q9Y616 596 aa3.85□□□□□ -1.79
CDC40-204ENST00000431461 SOWAHDA6NJG2 315 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 SLC22A31A6NKX4 558 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 ETF1P62495 437 aaKnown RBP3.84□□□□□ -1.79
CDC40-204ENST00000431461 PRAMEF13Q5VWM6 474 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 PCNX4Q63HM2 1172 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 SPPL2CQ8IUH8 684 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 DHX38Q92620 1227 aaKnown RBP3.84□□□□□ -1.79
CDC40-204ENST00000431461 DPH2Q9BQC3 489 aaPredicted RBP3.84□□□□□ -1.79
CDC40-204ENST00000431461 DUSP15Q9H1R2 295 aaPredicted RBP3.84□□□□□ -1.79
CDC40-204ENST00000431461 TACC3Q9Y6A5 838 aa3.84□□□□□ -1.79
CDC40-204ENST00000431461 GFRA2O00451 464 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 CELA3AP09093 270 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 TPP2P29144 1249 aaPredicted RBP3.83□□□□□ -1.8
CDC40-204ENST00000431461 CHRNEQ04844 493 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 EGR3Q06889 387 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 ZFYVE27Q5T4F4 411 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 PDZRN4Q6ZMN7 1036 aaPredicted RBP3.83□□□□□ -1.8
CDC40-204ENST00000431461 SV2BQ7L1I2 683 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 GAL3ST3Q96A11 431 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 TRIT1Q9H3H1 467 aaKnown RBP3.83□□□□□ -1.8
CDC40-204ENST00000431461 GPR160Q9UJ42 338 aa3.83□□□□□ -1.8
CDC40-204ENST00000431461 GNEQ9Y223 722 aaKnown RBP3.83□□□□□ -1.8
CDC40-204ENST00000431461 ZGLP1P0C6A0 271 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 GRK4P32298 578 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 CDK8P49336 464 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 GAB4Q2WGN9 574 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 WIPI1Q5MNZ9 446 aaPredicted RBP3.82□□□□□ -1.8
CDC40-204ENST00000431461 SLC6A19Q695T7 634 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 ALG1LQ6GMV1 187 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 HHIPL2Q6UWX4 724 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 MRPL41Q8IXM3 137 aaKnown RBP3.82□□□□□ -1.8
CDC40-204ENST00000431461 Q96M66 194 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 BDH2Q9BUT1 245 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 GPR62Q9BZJ7 368 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 FAM8A1Q9UBU6 413 aa3.82□□□□□ -1.8
CDC40-204ENST00000431461 CILPO75339 1184 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 LTKP29376 864 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 ETV3P41162 512 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 EPHB3P54753 998 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 RPS26P62854 115 aaKnown RBP3.81□□□□□ -1.8
CDC40-204ENST00000431461 ZXDAP98168 799 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 CAP1Q01518 475 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 ADGRF1Q5T601 910 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 SYTL4Q96C24 671 aaPredicted RBP3.81□□□□□ -1.8
CDC40-204ENST00000431461 C12orf49Q9H741 205 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 TJP2Q9UDY2 1190 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 DUSP13Q9UII6 198 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 CEP131Q9UPN4 1083 aa3.81□□□□□ -1.8
CDC40-204ENST00000431461 OR14I1A6ND48 311 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 N4BP3O15049 544 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 SDHBP21912 280 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 MAPK1P28482 360 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 SRSF3P84103 164 aaKnown RBP3.8□□□□□ -1.8
CDC40-204ENST00000431461 FMR1Q06787 632 aaKnown RBP eCLIP3.8□□□□□ -1.8
CDC40-204ENST00000431461 TTBK2Q6IQ55 1244 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 TSPYL5Q86VY4 417 aaPredicted RBP3.8□□□□□ -1.8
CDC40-204ENST00000431461 MCATQ8IVS2 390 aaKnown RBP3.8□□□□□ -1.8
CDC40-204ENST00000431461 LINC01356Q8N9X3 169 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 DNAJB8Q8NHS0 232 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 SORCS2Q96PQ0 1159 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 MENTQ9BUN1 341 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 BCL11AQ9H165 835 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 GPATCH2Q9NW75 528 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 BIN2Q9UBW5 565 aaPredicted RBP3.8□□□□□ -1.8
CDC40-204ENST00000431461 MBD1Q9UIS9 605 aaPredicted RBP3.8□□□□□ -1.8
CDC40-204ENST00000431461 SPG7Q9UQ90 795 aa3.8□□□□□ -1.8
CDC40-204ENST00000431461 PGRP06401 933 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 USP17L7P0C7H9 530 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 TNFRSF1AP19438 455 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 ERCC3P19447 782 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 MAPK8P45983 427 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 ZNF827Q17R98 1081 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 OLFML2BQ68BL8 750 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 ANKS4BQ8N8V4 417 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 PPP1R13LQ8WUF5 828 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 TMEM87BQ96K49 555 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 FRMD6Q96NE9 622 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 SIRT5Q9NXA8 310 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 KCNH3Q9ULD8 1083 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 PCDHA11Q9Y5I1 949 aa3.79□□□□□ -1.8
CDC40-204ENST00000431461 K7ESM1 405 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 ABLIM1O14639 778 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 IRS4O14654 1257 aaPredicted RBP3.78□□□□□ -1.8
CDC40-204ENST00000431461 ITGAEP38570 1179 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 PDE4BQ07343 736 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 DUSP4Q13115 394 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 AEBP1Q8IUX7 1158 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 DTWD2Q8NBA8 298 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 SHISA4Q96DD7 197 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 SETDB2Q96T68 719 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 EBF1Q9UH73 591 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 ADAM30Q9UKF2 790 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 WWC3Q9ULE0 1092 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 PCDHB5Q9Y5E4 795 aa3.78□□□□□ -1.8
CDC40-204ENST00000431461 C1QTNF3-AMACRE9PGA6 284 aa3.77□□□□□ -1.81
CDC40-204ENST00000431461 LMNB1P20700 586 aa3.77□□□□□ -1.81
CDC40-204ENST00000431461 MAGEA10P43363 369 aaPredicted RBP3.77□□□□□ -1.81
CDC40-204ENST00000431461 CNKSR3Q6P9H4 555 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms