RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 FEZ1Q99689 392 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 TMX1Q9H3N1 280 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 ARHGEF4Q9NR80 690 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 PRR13Q9NZ81 148 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 PFDN2Q9UHV9 154 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 PRKAB1Q9Y478 270 aa4.64□□□□□ -1.67
HMGB1P27-201ENST00000431429 EOMESO95936 686 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 GBP1P32455 592 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 FOXB2Q5VYV0 432 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 TDRD10Q5VZ19 366 aaKnown RBP4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 LETMD1Q6P1Q0 360 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 PODNQ7Z5L7 613 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 FAM20CQ8IXL6 584 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZSWIM2Q8NEG5 633 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 RNF141Q8WVD5 230 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 EXOC2Q96KP1 924 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 MRGPRX3Q96LB0 322 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 KREMEN1Q96MU8 473 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 ASPNQ9BXN1 380 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 APEX2Q9UBZ4 518 aa4.63□□□□□ -1.67
HMGB1P27-201ENST00000431429 A0A087WZG4 1122 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 CCDC163A0A0D9SF12 145 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 IQCA1LA6NCM1 817 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 RNGTTO60942 597 aaKnown RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 RFPL3O75679 317 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 NFICP08651 508 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 VIL1P09327 827 aaKnown RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 NAT2P11245 290 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 CD247P20963 164 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 IREB2P48200 963 aaKnown RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 CHMP4BP1P59074 171 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 RNF4P78317 190 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 NBPF9Q3BBW0 867 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 DALRD3Q5D0E6 543 aaKnown RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 DCAF15Q66K64 600 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 GPAT2Q6NUI2 795 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 C22orf34Q6ZV56 151 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 TXNRD3Q86VQ6 643 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 C7orf61Q8IZ16 206 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 FBLIM1Q8WUP2 373 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 SCARF2Q96GP6 870 aaPredicted RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 RCC1LQ96I51 464 aaKnown RBP4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 SLC26A8Q96RN1 970 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 PRDM10Q9NQV6 1147 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZNF451Q9Y4E5 1061 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 CNTNAP4Q9C0A0 1308 aa4.62□□□□□ -1.67
HMGB1P27-201ENST00000431429 HMGB1P09429 215 aaKnown RBP4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 FGFR1P11362 822 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 GLB1P16278 677 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 RAB6AP20340 208 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 MAP4P27816 1152 aaKnown RBP4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 GYS2P54840 703 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 AUHQ13825 339 aaKnown RBP4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 MAP7Q14244 749 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 TCEA2Q15560 299 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZNF227Q86WZ6 799 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 ARHGEF39Q8N4T4 335 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 XAGE3Q8WTP9 111 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 COX4I2Q96KJ9 171 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZNF512BQ96KM6 892 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 APBA2Q99767 749 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 MIPEPQ99797 713 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 DUSP23Q9BVJ7 150 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 GP6Q9HCN6 339 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 WHRNQ9P202 907 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 USP21Q9UK80 565 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 EMC9Q9Y3B6 208 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 DAGLAQ9Y4D2 1042 aa4.61□□□□□ -1.67
HMGB1P27-201ENST00000431429 RBAK-RBAKDNI3L0D1 243 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 SART1O43290 800 aaKnown RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 KCNQ2O43526 872 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 GAS2O43903 313 aaKnown RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 CLSTN1O94985 981 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 APBA3O96018 575 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 TP53P04637 393 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 ITGAVP06756 1048 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 BMP3P12645 472 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 ETV3P41162 512 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 USP11P51784 963 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 PPP2R2AP63151 447 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 CYP4F3Q08477 520 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 PTPROQ16827 1216 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 HEATR6Q6AI08 1181 aaKnown RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 CDH24Q86UP0 819 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 CCDC144CPQ8IYA2 1237 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 ANKRD13AQ8IZ07 590 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 SYTL5Q8TDW5 730 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 OSBP2Q969R2 916 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 Q96M66 194 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 YIPF2Q9BWQ6 316 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 NCOA5Q9HCD5 579 aaKnown RBP4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 IFT57Q9NWB7 429 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 PLAAQ9Y263 795 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 FHOD1Q9Y613 1164 aa4.6□□□□□ -1.67
HMGB1P27-201ENST00000431429 PPP1R12AO14974 1030 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 TBX1O43435 398 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 ASMTLO95671 621 aa4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 C6orf222P0C671 652 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 ZNF865P0CJ78 1059 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P27-201ENST00000431429 CHRNA4P43681 627 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms