RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SEPT8Q92599 483 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 CCDC102AQ96A19 550 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 MTMR9Q96QG7 549 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 NELL2Q99435 816 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 TSPY26PQ9H489 355 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 ZIM2Q9NZV7 527 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 STK39Q9UEW8 545 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 BARX2Q9UMQ3 279 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 TTLL13PA6NNM8 815 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 RHOBTB3O94955 611 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 PRKAR2BP31323 418 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 HNF1BP35680 557 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 SOX5P35711 763 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 POLD2P49005 469 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 HDAC4P56524 1084 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 CEBPZQ03701 1054 aaKnown RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 PAK2Q13177 524 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 CUL3Q13618 768 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 NAA30Q147X3 362 aaPredicted RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 IGSF11Q5DX21 431 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 C20orf194Q5TEA3 1177 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 RFWD2Q8NHY2 731 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 C8orf37Q96NL8 207 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 RBSNQ9H1K0 784 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 EMC3Q9P0I2 261 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 SPDYE5A6NIY4 337 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 FLOT1O75955 427 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 ATG7O95352 703 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 MYBP10242 640 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 HOXC13P31276 330 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 PPP1R2P41236 205 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 MAPRE1Q15691 268 aaKnown RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 PPP1R2P3Q6NXS1 205 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 FAM180BQ6P0A1 224 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 EHBP1Q8NDI1 1231 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 C8orf48Q96LL4 319 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 ESF1Q9H501 851 aaKnown RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 MIS18AQ9NYP9 233 aa5.97□□□□□ -1.45
PTPN4-203ENST00000430976 THOC2Q8NI27 1593 aaKnown RBP5.97□□□□□ -1.45
PTPN4-203ENST00000430976 TBKBP1A7MCY6 615 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SLC4A2P04920 1241 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 IFIT1P09914 478 aaKnown RBP5.96□□□□□ -1.45
PTPN4-203ENST00000430976 POTEJP0CG39 1038 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 FDX1P10109 184 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 ALDH3A1P30838 453 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 TXLNAP40222 546 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SEPHS1P49903 392 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 COPAP53621 1224 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SEMA3AQ14563 771 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 STK11Q15831 433 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SLC5A9Q2M3M2 681 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 PCGF5Q86SE9 256 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 RASSF3Q86WH2 238 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SMC1BQ8NDV3 1235 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 RNPC3Q96LT9 517 aaKnown RBP5.96□□□□□ -1.45
PTPN4-203ENST00000430976 FOXP3Q9BZS1 431 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 HOMER2Q9NSB8 354 aa5.96□□□□□ -1.45
PTPN4-203ENST00000430976 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.96□□□□□ -1.45
PTPN4-203ENST00000430976 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.96□□□□□ -1.45
PTPN4-203ENST00000430976 ZBBXA8MT70 800 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 IFRD1O00458 451 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ZBTB43O43298 467 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 MTSS1O43312 755 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 IDH1O75874 414 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PCP11498 1178 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ATP5DP30049 168 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 CYP2C19P33261 490 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 UBA7P41226 1012 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 SCNN1DP51172 638 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PDE1CQ14123 709 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 VEPH1Q14D04 833 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 INO80DQ53TQ3 878 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 TMTC4Q5T4D3 741 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 GRAMD4Q6IC98 578 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 KIF6Q6ZMV9 814 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PRR23CQ6ZRP0 262 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 JAMLQ86YT9 394 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 LILRB1Q8NHL6 650 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 SLC22A8Q8TCC7 542 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 TTC17Q96AE7 1141 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 DHX58Q96C10 678 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 TSC22D3Q99576 134 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NUDT16L1Q9BRJ7 211 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 VPS37BQ9H9H4 285 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 DBNDD1Q9H9R9 158 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NCKAP5LQ9HCH0 1330 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 E2F3O00716 465 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ORC4O43929 436 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 NPPAP01160 153 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 DNAJB1P25685 340 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ANXA13P27216 316 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 ASPHQ12797 758 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 PDE3BQ13370 1112 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 SKOR2Q2VWA4 1001 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 BTNL9Q6UXG8 535 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 DGLUCYQ7Z3D6 616 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 MDM1Q8TC05 714 aa5.96□□□□□ -1.46
PTPN4-203ENST00000430976 LUC7LQ9NQ29 371 aaKnown RBP5.96□□□□□ -1.46
PTPN4-203ENST00000430976 AVENQ9NQS1 362 aaPredicted RBP5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms