RNA–Protein interactions for RNA: ENST00000430804.5

LRRK2-204, Transcript of leucine rich repeat kinase 2, humanhuman

TSL 1 (best)

Gene LRRK2, Length 6,400 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2-204ENST00000430804 TSHZ2Q9NRE2 1034 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 TMEM39AQ9NV64 488 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 PPARGP37231 505 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 AKNAD1Q5T1N1 836 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 LDHDQ86WU2 507 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 RNF139Q8WU17 664 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 STAMQ92783 540 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 VPS50Q96JG6 964 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 TEKT3Q9BXF9 490 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ELP3Q9H9T3 547 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 HMX1Q9NP08 348 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 PAG1Q9NWQ8 432 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 LSM7Q9UK45 103 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 PCDHB12Q9Y5F1 795 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 A0A0G2JLW4 131 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L12C9JPN9 530 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 USP17L21D6R901 530 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 OPA1O60313 960 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 BTDP43251 543 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 GCKRQ14397 625 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 STYK1Q6J9G0 422 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ARMCX2Q7L311 632 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 LUZP1Q86V48 1076 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 IFNL3Q8IZI9 196 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 SPDYE1Q8NFV5 336 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 TCP11Q8WWU5 503 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ZFP91Q96JP5 570 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 METTL22Q9BUU2 404 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 NARFQ9UHQ1 456 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 FAM184BQ9ULE4 1060 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ADAMTS8Q9UP79 889 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 SBDSQ9Y3A5 250 aaKnown RBP eCLIP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ABCA8O94911 1581 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ATP10BO94823 1461 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ECE2O60344 883 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 HOXC6P09630 235 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 DMWDQ09019 674 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 SLFN13Q68D06 897 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 RAB42Q8N4Z0 105 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 YME1L1Q96TA2 773 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 MMTAG2Q9BU76 263 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 GBP3Q9H0R5 595 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 TOPORSQ9NS56 1045 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 AATFQ9NY61 560 aaKnown RBP eCLIP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 UGGT2Q9NYU1 1516 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 DDX39AO00148 427 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 KDM1AO60341 852 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 ZWINTO95229 277 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 PRMT2P55345 433 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 WASHC5Q12768 1159 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 IFRD2Q12894 506 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 MTERF2Q49AM1 385 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 TMED8Q6PL24 325 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 C4orf50Q6ZRC1 276 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 NAP1L5Q96NT1 182 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 OXCT2Q9BYC2 517 aaPredicted RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 RTN4Q9NQC3 1192 aaKnown RBP5.03□□□□□ -1.6
LRRK2-204ENST00000430804 SPATA31A3Q5VYP0 1347 aa5.03□□□□□ -1.6
LRRK2-204ENST00000430804 C19orf81C9J6K1 198 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 SMARCA5O60264 1052 aaPredicted RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 TRPA1O75762 1119 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 AMHP03971 560 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 SKIP12755 728 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CYP4A11Q02928 519 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 RASA3Q14644 834 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 FBXW10Q5XX13 1052 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 KRT25Q7Z3Z0 450 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 AFAP1L2Q8N4X5 818 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 MB21D1Q8N884 522 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 SEPT8Q92599 483 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CSRNP2Q9H175 543 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 C1orf115Q9H7X2 142 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 PRKRIP1Q9H875 184 aaPredicted RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 IFT122Q9HBG6 1241 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 ENTPD7Q9NQZ7 604 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 IBTKQ9P2D0 1353 aaPredicted RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 KPNA6O60684 536 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 MBD3O95983 291 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 EPB41P11171 864 aaKnown RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CD19P15391 556 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CYP2B6P20813 491 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 LIG4P49917 911 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 APBA1Q02410 837 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CATSPER4Q7RTX7 472 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 ACSF2Q96CM8 615 aaPredicted RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 IQCGQ9H095 443 aaKnown RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 EXOC6BQ9Y2D4 811 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.02□□□□□ -1.61
LRRK2-204ENST00000430804 MAP3K15Q6ZN16 1313 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 MEI4A8MW99 385 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 ERVV-1B6SEH8 477 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 USP17L10C9JJH3 530 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 E7EVH7 732 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 MBD4O95243 580 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 YEATS4O95619 227 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 TMEM191BP0C7N4 346 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 GCKP35557 465 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 KRT2P35908 639 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 ATP6V1E1P36543 226 aa5.02□□□□□ -1.61
LRRK2-204ENST00000430804 CTSWP56202 376 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms