RNA–Protein interactions for RNA: ENST00000429899.1

ATG4B-211, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 524 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-211ENST00000429899 RASIP1Q5U651 963 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 SLC44A5Q8NCS7 719 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 LPIN2Q92539 896 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 CCDC136Q96JN2 1154 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 CD320Q9NPF0 282 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 SPTBN4Q9H254 2564 aa12.35□□□□□ -0.43
ATG4B-211ENST00000429899 MCM3APO60318 1980 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 FAAP100Q0VG06 881 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 FAM47AQ5JRC9 791 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 PRAMEF19Q5SWL8 479 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 ZNF384Q8TF68 577 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 C1orf115Q9H7X2 142 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 EMILIN3Q9NT22 766 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
ATG4B-211ENST00000429899 MROH7-TTC4A0A0A0MT08 1334 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 ZNF318Q5VUA4 2279 aa12.34□□□□□ -0.43
ATG4B-211ENST00000429899 C19orf81C9J6K1 198 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 SEPT4O43236 478 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 ACRP10323 421 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 PHKA1P46020 1223 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 FAM163AQ96GL9 167 aaPredicted RBP12.33□□□□□ -0.44
ATG4B-211ENST00000429899 USP44Q9H0E7 712 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 BTBD7Q9P203 1132 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 PHF24Q9UPV7 400 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 RABGAP1Q9Y3P9 1069 aa12.33□□□□□ -0.44
ATG4B-211ENST00000429899 COL4A4P53420 1690 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-211ENST00000429899 GPR75-ASB3A0A0A6YYF3 556 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 USP17L10C9JJH3 530 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 NPM3O75607 178 aaKnown RBP12.32□□□□□ -0.44
ATG4B-211ENST00000429899 TIMP1P01033 207 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 GNAI3P08754 354 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 PPIGQ13427 754 aaKnown RBP eCLIP12.32□□□□□ -0.441e-10■■□□□ 13.7
ATG4B-211ENST00000429899 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-211ENST00000429899 CCDC174Q6PII3 467 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 ZNF365Q70YC5 407 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 DZIP1Q86YF9 867 aaKnown RBP12.32□□□□□ -0.44
ATG4B-211ENST00000429899 GTF3C2Q8WUA4 911 aaPredicted RBP12.32□□□□□ -0.44
ATG4B-211ENST00000429899 PHOX2BQ99453 314 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 DNAJC18Q9H819 358 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 DENND2AQ9ULE3 1009 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 COG5Q9UP83 839 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 IVNS1ABPQ9Y6Y0 642 aa12.32□□□□□ -0.44
ATG4B-211ENST00000429899 TRIOO75962 3097 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 APBB1O00213 710 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 RFXAPO00287 272 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 CSF2RAP15509 400 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 CCNA1P78396 465 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 PPP2R2DQ66LE6 453 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 MFSD5Q6N075 450 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 CEP85Q6P2H3 762 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 ATG9AQ7Z3C6 839 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 SIRT2Q8IXJ6 389 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 ABCF2Q9UG63 623 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 SCN5AQ14524 2016 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 PTPRSQ13332 1948 aa12.31□□□□□ -0.44
ATG4B-211ENST00000429899 A0A1W2PQ45 241 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 A0A1W2PQY0 241 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 DCDC2CA8MYV0 355 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 EYA2O00167 538 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 GTPBP6O43824 516 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 GDF11O95390 407 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 IGHDP01880 384 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 GNAI2P04899 355 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 ASNSP08243 561 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 RFX5P48382 616 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 RABGGTBP53611 331 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 MECOMQ03112 1051 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 OLFML2BQ68BL8 750 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 KRT40Q6A162 431 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 PSRC1Q6PGN9 363 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 CENPQQ7L2Z9 268 aaPredicted RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 DPP9Q86TI2 863 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 HLA-CQ95604 372 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 HERC5Q9UII4 1024 aaKnown RBP12.3□□□□□ -0.44
ATG4B-211ENST00000429899 MTCH2Q9Y6C9 303 aa12.3□□□□□ -0.44
ATG4B-211ENST00000429899 MYH8P13535 1937 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 SEMA3EO15041 775 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ST18O60284 1047 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 COBLO75128 1261 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 PGK1P00558 417 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 MYOGP15173 224 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ADORA2AP29274 412 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ADORA1P30542 326 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 FOXK2Q01167 660 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 RASGRF1Q13972 1273 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ZYXQ15942 572 aaKnown RBP12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ATP2B3Q16720 1220 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 ANKRD33Q7Z3H0 272 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 XPNPEP3Q9NQH7 507 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 GNL3LQ9NVN8 582 aaKnown RBP12.29□□□□□ -0.44
ATG4B-211ENST00000429899 TBX21Q9UL17 535 aa12.29□□□□□ -0.44
ATG4B-211ENST00000429899 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 CATSPERGQ6ZRH7 1159 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 SLF2Q8IX21 1173 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 RPAP2Q8IXW5 612 aaPredicted RBP12.28□□□□□ -0.44
ATG4B-211ENST00000429899 ZGPATQ8N5A5 531 aaKnown RBP12.28□□□□□ -0.44
ATG4B-211ENST00000429899 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
ATG4B-211ENST00000429899 TOX2Q96NM4 488 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms