RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 ZAP70P43403 619 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 GKAP1Q5VSY0 366 aaPredicted RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 PDZD4Q76G19 769 aaPredicted RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 KRT26Q7Z3Y9 468 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 MCF2L2Q86YR7 1114 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 MCUR1Q96AQ8 359 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 AMFRQ9UKV5 643 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 CD2APQ9Y5K6 639 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 ATP10AO60312 1499 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 GBP6Q6ZN66 633 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 CCDC89Q8N998 374 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 METTL14Q9HCE5 456 aaKnown RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 H7C1D1 291 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 XRCC5P13010 732 aaKnown RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 ATF7P17544 494 aaPredicted RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 SLC12A2P55011 1212 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 EIF4A1P60842 406 aaKnown RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 MIER3Q7Z3K6 550 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 ZNF654Q8IZM8 581 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 GTF3C6Q969F1 213 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 RASSF2P50749 326 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 TSNAXIP1Q2TAA8 658 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 SLC17A8Q8NDX2 589 aa14.13□□□□□ -0.15
LDB3-205ENST00000429277 CACYBPQ9HB71 228 aaKnown RBP14.13□□□□□ -0.15
LDB3-205ENST00000429277 PLEKHG3A1L390 1219 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 SMCO2A6NFE2 343 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 CASQ2O14958 399 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 CTSWP56202 376 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 CTDSPL2Q05D32 466 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 WHAMMP3Q1A5X7 153 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 SH2D4BQ5SQS7 431 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 MYSM1Q5VVJ2 828 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 VSIG1Q86XK7 387 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 MYOCDQ8IZQ8 938 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 IFIH1Q9BYX4 1025 aaKnown RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 A1BGP04217 495 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 DYMQ7RTS9 669 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 MAPKAPK5Q8IW41 473 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 ZNF594Q96JF6 807 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 ZFP91Q96JP5 570 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 RASSF4Q9H2L5 321 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 CSADQ9Y600 493 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 DDAH1O94760 285 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 MAP3K21Q5TCX8 1036 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 DNAJC10Q8IXB1 793 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 TGFBRAP1Q8WUH2 860 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 NUF2Q9BZD4 464 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 RBSNQ9H1K0 784 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 MAPK8IP1Q9UQF2 711 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 KDRP35968 1356 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 HADHQ16836 314 aaKnown RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 PHLDB2Q86SQ0 1253 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 CPXCR1Q8N123 301 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 CARD6Q9BX69 1037 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 WDR62O43379 1518 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 NEURL1BA8MQ27 555 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 ZBTB24O43167 697 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 PHBP35232 272 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 BEND3Q5T5X7 828 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 OR8K1Q8NGG5 319 aa14.12□□□□□ -0.15
LDB3-205ENST00000429277 ZNF277Q9NRM2 450 aaPredicted RBP14.12□□□□□ -0.15
LDB3-205ENST00000429277 TNNI1P19237 187 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 BLIDQ8IZY5 108 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 FAM114A2Q9NRY5 505 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 FOSP01100 380 aaPredicted RBP14.11□□□□□ -0.15
LDB3-205ENST00000429277 GABPB1Q06547 395 aaPredicted RBP14.11□□□□□ -0.15
LDB3-205ENST00000429277 AOC3Q16853 763 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 DENND2CQ68D51 928 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 PFDN6O15212 129 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 NR1I2O75469 434 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 TAF5LO75529 589 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 KRT19P08727 400 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 HOXA7P31268 230 aaPredicted RBP14.11□□□□□ -0.15
LDB3-205ENST00000429277 GABPAQ06546 454 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 BEGAINQ9BUH8 593 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 ABCC2Q92887 1545 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 RNF40O75150 1001 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 KRT15P19012 456 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 IRX4P78413 519 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 USH1GQ495M9 461 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 NOSTRINQ8IVI9 506 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 PHKBQ93100 1093 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 ZSCAN10Q96SZ4 725 aaPredicted RBP14.11□□□□□ -0.15
LDB3-205ENST00000429277 USP40Q9NVE5 1235 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 TRIM35Q9UPQ4 493 aa14.11□□□□□ -0.15
LDB3-205ENST00000429277 INPP5BP32019 993 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 ZYXQ15942 572 aaKnown RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 BBOF1Q8ND07 529 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 ADPGKQ9BRR6 497 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 RIC8AQ9NPQ8 531 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 DDX39AO00148 427 aaKnown RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 SSH3Q8TE77 659 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 CABS1Q96KC9 395 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 PPANQ9NQ55 473 aaKnown RBP14.1□□□□□ -0.15
LDB3-205ENST00000429277 GINS2Q9Y248 185 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 USTQ9Y2C2 406 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 TNNC2P02585 160 aa14.1□□□□□ -0.15
LDB3-205ENST00000429277 BRD3Q15059 726 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms