RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 TMX2Q9Y320 296 aa18.18■□□□□ 0.5
MDM2-215ENST00000428863 GREB1LQ9C091 1923 aaPredicted RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 M0R2C6 588 aa18.17■□□□□ 0.5
MDM2-215ENST00000428863 PRKAR2AP13861 404 aaKnown RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 ICA1Q05084 483 aa18.17■□□□□ 0.5
MDM2-215ENST00000428863 CACNB2Q08289 660 aaPredicted RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 CCAR1Q8IX12 1150 aaKnown RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 APPBP2Q92624 585 aa18.17■□□□□ 0.5
MDM2-215ENST00000428863 PAWRQ96IZ0 340 aaKnown RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 FLRT1Q9NZU1 646 aa18.17■□□□□ 0.5
MDM2-215ENST00000428863 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
MDM2-215ENST00000428863 A0A0G2JMZ2 1700 aa18.17■□□□□ 0.5
MDM2-215ENST00000428863 COL11A1P12107 1806 aaPredicted RBP18.16■□□□□ 0.5
MDM2-215ENST00000428863 EEF2P13639 858 aaKnown RBP18.16■□□□□ 0.5
MDM2-215ENST00000428863 PTPREP23469 700 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 RGS2P41220 211 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 MAP2K5Q13163 448 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 SBK1Q52WX2 424 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 SPICE1Q8N0Z3 855 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 GPATCH3Q96I76 525 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 SEC62Q99442 399 aaKnown RBP18.16■□□□□ 0.5
MDM2-215ENST00000428863 VCPKMTQ9H867 229 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 EPB41L4AQ9HCS5 686 aaPredicted RBP18.16■□□□□ 0.5
MDM2-215ENST00000428863 TTC41PQ6P2S7 1318 aa18.16■□□□□ 0.5
MDM2-215ENST00000428863 GPAA1O43292 621 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 CAPN2P17655 700 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 CCND3P30281 292 aaPredicted RBP18.15■□□□□ 0.5
MDM2-215ENST00000428863 DSG3P32926 999 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 CCNA1P78396 465 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 STK11IPQ8N1F8 1099 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 NPLOC4Q8TAT6 608 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 DDRGK1Q96HY6 314 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 HTATIP2Q9BUP3 242 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 MOV10L1Q9BXT6 1211 aaKnown RBP18.15■□□□□ 0.5
MDM2-215ENST00000428863 TANGO6Q9C0B7 1094 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 ARHGEF10LQ9HCE6 1279 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 HOXC10Q9NYD6 342 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 ARPP21Q9UBL0 812 aaPredicted RBP18.15■□□□□ 0.5
MDM2-215ENST00000428863 SALL3Q9BXA9 1300 aa18.15■□□□□ 0.5
MDM2-215ENST00000428863 SLC15A5A6NIM6 579 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 ZKSCAN1P17029 563 aaPredicted RBP18.14■□□□□ 0.49
MDM2-215ENST00000428863 RASA1P20936 1047 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 WDR78Q5VTH9 848 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 GIMAP6Q6P9H5 292 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 AMOTL1Q8IY63 956 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 TRMT44Q8IYL2 757 aaKnown RBP18.14■□□□□ 0.49
MDM2-215ENST00000428863 APBA2Q99767 749 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 OGDHLQ9ULD0 1010 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 TRIOBPQ9H2D6 2365 aa18.14■□□□□ 0.49
MDM2-215ENST00000428863 MINDY4BA8MYZ0 360 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 IGHA2P01877 340 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 ZFYP08048 801 aaPredicted RBP18.13■□□□□ 0.49
MDM2-215ENST00000428863 GRB14Q14449 540 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 LHX8Q68G74 356 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 LPAR1Q92633 364 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 ATG4CQ96DT6 458 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 SPATC1LQ9H0A9 340 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 KANSL2Q9H9L4 492 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 FRMPD3Q5JV73 1810 aa18.13■□□□□ 0.49
MDM2-215ENST00000428863 HOXC6P09630 235 aa18.12■□□□□ 0.49
MDM2-215ENST00000428863 ATP2B2Q01814 1243 aa18.12■□□□□ 0.49
MDM2-215ENST00000428863 ANKLE1Q8NAG6 615 aa18.12■□□□□ 0.49
MDM2-215ENST00000428863 YTHDC1Q96MU7 727 aaKnown RBP18.12■□□□□ 0.49
MDM2-215ENST00000428863 CWC22Q9HCG8 908 aaKnown RBP18.12■□□□□ 0.49
MDM2-215ENST00000428863 FBXO28Q9NVF7 368 aa18.12■□□□□ 0.49
MDM2-215ENST00000428863 MYH4Q9Y623 1939 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 PATL2C9JE40 543 aaKnown RBP18.11■□□□□ 0.49
MDM2-215ENST00000428863 ERC2O15083 957 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 WDR46O15213 610 aaKnown RBP18.11■□□□□ 0.49
MDM2-215ENST00000428863 FLOT1O75955 427 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 GLRX3O76003 335 aaKnown RBP18.11■□□□□ 0.49
MDM2-215ENST00000428863 ERCC3P19447 782 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 MX1P20591 662 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 FXR1P51114 621 aaKnown RBP eCLIP18.11■□□□□ 0.49
MDM2-215ENST00000428863 ANKRD45Q5TZF3 282 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 CHRDL2Q6WN34 429 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 NECAB2Q7Z6G3 386 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 IFNL3Q8IZI9 196 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 SH2D4AQ9H788 454 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 ADAMTS5Q9UNA0 930 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 ROBO3Q96MS0 1386 aa18.11■□□□□ 0.49
MDM2-215ENST00000428863 ZNF236Q9UL36 1845 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 COBLO75128 1261 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 TMEM132BQ14DG7 1078 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 ZMYM1Q5SVZ6 1142 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 SAMD1Q6SPF0 538 aaPredicted RBP18.1■□□□□ 0.49
MDM2-215ENST00000428863 PRO3102Q9H379 93 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 RBM27Q9P2N5 1060 aaKnown RBP18.1■□□□□ 0.49
MDM2-215ENST00000428863 IVNS1ABPQ9Y6Y0 642 aa18.1■□□□□ 0.49
MDM2-215ENST00000428863 IGKV6D-41A0A0C4DH26 115 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 FOXP2O15409 715 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 EVI5O60447 810 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 PRDM1O75626 825 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 GNAT2P19087 354 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 ADORA2AP29274 412 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 CYP2C19P33261 490 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 MB21D1Q8N884 522 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 SHCBP1Q8NEM2 672 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 TRPV1Q8NER1 839 aa18.09■□□□□ 0.49
MDM2-215ENST00000428863 FSD1Q9BTV5 496 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms