RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 BARGINQ6ZT62 677 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 RASGRP2Q7LDG7 609 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 MSL3Q8N5Y2 521 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 OXER1Q8TDS5 423 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 HNRNPLLQ8WVV9 542 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 CCDC87Q9NVE4 849 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 CEP131Q9UPN4 1083 aa10.02□□□□□ -0.81
CDH13-202ENST00000428848 RRP15Q9Y3B9 282 aaKnown RBP10.02□□□□□ -0.81
CDH13-202ENST00000428848 SOWAHDA6NJG2 315 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 GPTP24298 496 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 WTAPQ15007 396 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 KARSQ15046 597 aaKnown RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 SRGAP1Q7Z6B7 1085 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 TMTC2Q8N394 836 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 MAGEB6Q8N7X4 407 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 CEP120Q8N960 986 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 GJD4Q96KN9 370 aaPredicted RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 IRX2Q9BZI1 471 aaPredicted RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 ARMT1Q9H993 441 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 RAB21Q9UL25 225 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 ZBTB1Q9Y2K1 713 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 MYH13Q9UKX3 1938 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 DLEC1Q9Y238 1755 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 ITIH6Q6UXX5 1313 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 CCDC196A0A1B0GTZ2 297 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 PPP1R3GB7ZBB8 358 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 TRIM66O15016 1216 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 GNAT2P19087 354 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 USP5P45974 858 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 RBL2Q08999 1139 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 MAP3K12Q12852 859 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 DPYDQ12882 1025 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 TUBB2AQ13885 445 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 RASGRF1Q13972 1273 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 SEC23AQ15436 765 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 ZNF34Q8IZ26 560 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 FANCBQ8NB91 859 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 MSANTD4Q8NCY6 345 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 CCDC12Q8WUD4 166 aaPredicted RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 TUBB2BQ9BVA1 445 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 RNF26Q9BY78 433 aaPredicted RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 ANKZF1Q9H8Y5 726 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 ZCCHC17Q9NP64 241 aaKnown RBP10.01□□□□□ -0.81
CDH13-202ENST00000428848 CDC23Q9UJX2 597 aa10.01□□□□□ -0.81
CDH13-202ENST00000428848 SLIT2O94813 1529 aa10□□□□□ -0.81
CDH13-202ENST00000428848 RGL2O15211 777 aa10□□□□□ -0.81
CDH13-202ENST00000428848 PRKAB2O43741 272 aa10□□□□□ -0.81
CDH13-202ENST00000428848 MFAP3LO75121 409 aa10□□□□□ -0.81
CDH13-202ENST00000428848 RPS6KA5O75582 802 aa10□□□□□ -0.81
CDH13-202ENST00000428848 ACTN2P35609 894 aa10□□□□□ -0.81
CDH13-202ENST00000428848 ATP6V1AP38606 617 aa10□□□□□ -0.81
CDH13-202ENST00000428848 EIF5P55010 431 aaKnown RBP10□□□□□ -0.81
CDH13-202ENST00000428848 PPP2R5BQ15173 497 aa10□□□□□ -0.81
CDH13-202ENST00000428848 PKN1Q16512 942 aa10□□□□□ -0.81
CDH13-202ENST00000428848 LONRF2Q1L5Z9 754 aa10□□□□□ -0.81
CDH13-202ENST00000428848 ZNF654Q8IZM8 581 aa10□□□□□ -0.81
CDH13-202ENST00000428848 IGSF22Q8N9C0 903 aa10□□□□□ -0.81
CDH13-202ENST00000428848 PAGE5Q96GU1 130 aa10□□□□□ -0.81
CDH13-202ENST00000428848 CABP5Q9NP86 173 aa10□□□□□ -0.81
CDH13-202ENST00000428848 LCMT1Q9UIC8 334 aa10□□□□□ -0.81
CDH13-202ENST00000428848 TAOK2Q9UL54 1235 aa10□□□□□ -0.81
CDH13-202ENST00000428848 DOT1LQ8TEK3 1739 aa10□□□□□ -0.81
CDH13-202ENST00000428848 A0A0U1RQJ8 604 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 LRRC10BA6NIK2 292 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SLC5A1P13866 664 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 MAGEA9P43362 315 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 FUT2Q10981 343 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SART3Q15020 963 aaKnown RBP9.99□□□□□ -0.81
CDH13-202ENST00000428848 CCDC152Q4G0S7 254 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 BEND6Q5SZJ8 279 aaPredicted RBP9.99□□□□□ -0.81
CDH13-202ENST00000428848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.99□□□□□ -0.81
CDH13-202ENST00000428848 CMTR1Q8N1G2 835 aaKnown RBP9.99□□□□□ -0.81
CDH13-202ENST00000428848 LCORLQ8N3X6 602 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 CEP112Q8N8E3 955 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 ATRIPQ8WXE1 791 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 CCDC51Q96ER9 411 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 GSDMAQ96QA5 445 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 CTAGE1Q96RT6 745 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 ZKSCAN3Q9BRR0 538 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 PHF20Q9BVI0 1012 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 RREB1Q92766 1687 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SPATA31A5Q5VU36 1347 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SPATA31A7Q8IWB4 1347 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SYNRGQ9UMZ2 1314 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 LOC102724428A0A0B4J2F2 783 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 FAM205CA6NFA0 338 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 SIK1P57059 783 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 CHMP4BP1P59074 171 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 TUBB4BP68371 445 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 TTC31Q49AM3 519 aaPredicted RBP9.99□□□□□ -0.81
CDH13-202ENST00000428848 EARS2Q5JPH6 523 aaKnown RBP9.99□□□□□ -0.81
CDH13-202ENST00000428848 EPSTI1Q96J88 318 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 ANAPC4Q9UJX5 808 aa9.99□□□□□ -0.81
CDH13-202ENST00000428848 TRIM75PA6NK02 468 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 H3BQF6 201 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 POTEB2H3BUK9 544 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 GYPCP04921 128 aa9.98□□□□□ -0.81
CDH13-202ENST00000428848 IGHMBP2P38935 993 aaKnown RBP9.98□□□□□ -0.81
CDH13-202ENST00000428848 LEKR1Q6ZMV7 388 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms