RNA–Protein interactions for RNA: ENST00000428842.1

HMGCLL1-206, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 1 (best) BASIC

Gene HMGCLL1, Length 2,437 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-206ENST00000428842 SART3Q15020 963 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 FOXP4Q8IVH2 680 aaPredicted RBP11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 GPKOWQ92917 476 aaPredicted RBP eCLIP11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 TMEM87BQ96K49 555 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 SLC26A6Q9BXS9 759 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZNF341Q9BYN7 854 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 EHD4Q9H223 541 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 ELP3Q9H9T3 547 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 ATAD5Q96QE3 1844 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 IGKV6D-41A0A0C4DH26 115 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 HTRA3P83110 453 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 GRM1Q13255 1194 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 VGLL4Q14135 290 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 NTRK3Q16288 839 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 NOM1Q5C9Z4 860 aaKnown RBP11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 SGMS1Q86VZ5 419 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 CERS3Q8IU89 383 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 MAD2L2Q9UI95 211 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZHX2Q9Y6X8 837 aa11.11□□□□□ -0.63
HMGCLL1-206ENST00000428842 VPS37CA5D8V6 355 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 LIFRP42702 1097 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 SPP2Q13103 211 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 MTMR2Q13614 643 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 CDC37L1Q7L3B6 337 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 METTL16Q86W50 562 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 IL27Q8NEV9 243 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 KLRG1Q96E93 195 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 WNK4Q96J92 1243 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 KCNJ14Q9UNX9 436 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 SMC3Q9UQE7 1217 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 V9GY48 417 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 CPLX1O14810 134 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 RTN1Q16799 776 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 FKBP1CQ5VVH2 108 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 TMED8Q6PL24 325 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 USP50Q70EL3 339 aaPredicted RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 CATIPQ7Z7H3 387 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 APOBEC3FQ8IUX4 373 aaKnown RBP11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 OTOFQ9HC10 1997 aa11.1□□□□□ -0.63
HMGCLL1-206ENST00000428842 TCHHQ07283 1943 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 IQCA1LA6NCM1 817 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 F5H6K3 240 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 EIF5BO60841 1220 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 TTLL1O95922 423 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 PDHBP11177 359 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 SYT1P21579 422 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 DDIT3P35638 169 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 KLRC3Q07444 240 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 ANKRD1Q15327 319 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 CST9Q5W186 159 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 OTUD5Q96G74 571 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 ZNF274Q96GC6 653 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 FTOQ9C0B1 505 aaKnown RBP eCLIP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 GDPD2Q9HCC8 539 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 HERC5Q9UII4 1024 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 SCN4AP35499 1836 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 DCAF8L1A6NGE4 600 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 DHX16O60231 1041 aaKnown RBP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 HMGCS2P54868 508 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 CCDC96Q2M329 555 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 GPBP1L1Q9HC44 474 aaPredicted RBP11.09□□□□□ -0.63
HMGCLL1-206ENST00000428842 GREB1LQ9C091 1923 aaPredicted RBP11.08□□□□□ -0.63
HMGCLL1-206ENST00000428842 NPM3O75607 178 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 CELF2O95319 508 aaKnown RBP11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 NDUFB10O96000 172 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 EVCP57679 992 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 FAM83BQ5T0W9 1011 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 WDR90Q96KV7 1748 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 FEZ1Q99689 392 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 ALDH8A1Q9H2A2 487 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 VPS54Q9P1Q0 977 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 ORC3Q9UBD5 711 aaPredicted RBP11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 FAM205CA6NFA0 338 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 USP17L10C9JJH3 530 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 KLRF2D3W0D1 207 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 FUT2Q10981 343 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 TMEM179Q6ZVK1 233 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 DGKHQ86XP1 1220 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 ZNF287Q9HBT7 754 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 CABP5Q9NP86 173 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 SNCAIPQ9Y6H5 919 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 MYH6P13533 1939 aa11.08□□□□□ -0.64
HMGCLL1-206ENST00000428842 IRF6O14896 467 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 PTPRAP18433 802 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 IKQ13123 557 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 LARP1BQ659C4 914 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 SYNE3Q6ZMZ3 975 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 UIMC1Q96RL1 719 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 PIGSQ96S52 555 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 R3HDMLQ9H3Y0 253 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 KANSL2Q9H9L4 492 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 DDX49Q9Y6V7 483 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 TMEM232C9JQI7 657 aa11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 PPP1R11O60927 126 aaPredicted RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 TOP1P11387 765 aaKnown RBP11.07□□□□□ -0.64
HMGCLL1-206ENST00000428842 GJA5P36382 358 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms