RNA–Protein interactions for RNA: ENST00000428643.1

HMGA1P4-201, Transcript of high mobility group AT-hook 1 pseudogene 4, humanhuman

TSL 2 BASIC

Gene HMGA1P4, Length 334 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P4-201ENST00000428643 AS3MTQ9HBK9 375 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 SH2B1Q9NRF2 756 aaPredicted RBP9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 NYAP2Q9P242 653 aa9.25□□□□□ -0.93
HMGA1P4-201ENST00000428643 PAPPA2Q9BXP8 1791 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 TRIM75PA6NK02 468 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CALM1P0DP23 149 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CALM2P0DP24 149 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CALM3P0DP25 149 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 PTPRAP18433 802 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 PDIA3P30101 505 aaKnown RBP9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 NOVP48745 357 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 EVCP57679 992 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 MTMR2Q13614 643 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZYXQ15942 572 aaKnown RBP9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 MAP3K11Q16584 847 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 ME3Q16798 604 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 RTN1Q16799 776 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCDC96Q2M329 555 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCDC83Q8IWF9 413 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 NECAB1Q8N987 351 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 CTCFLQ8NI51 663 aaPredicted RBP9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 ACER1Q8TDN7 264 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 OTUD5Q96G74 571 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZNF274Q96GC6 653 aaPredicted RBP9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 NCOA5Q9HCD5 579 aaKnown RBP9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 GOPCQ9HD26 462 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZHX2Q9Y6X8 837 aa9.24□□□□□ -0.93
HMGA1P4-201ENST00000428643 A0A1W2PRG0 241 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SPDYE5A6NIY4 337 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 CPLX1O14810 134 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 PFKFB2O60825 505 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 NDUFB10O96000 172 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 KIF5BP33176 963 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 ECE1P42892 770 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 RCAN1P53805 252 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCT2P78371 535 aaKnown RBP9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 FSTL1Q12841 308 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SPP2Q13103 211 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 LDLRAD1Q5T700 205 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLFN13Q68D06 897 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 RASGRP2Q7LDG7 609 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 ERO1BQ86YB8 467 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SIAH1Q8IUQ4 282 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SPICE1Q8N0Z3 855 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 ZNF280CQ8ND82 737 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 GMCL1P1Q8NEA9 526 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 GTF3C6Q969F1 213 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 SYNPO2Q9UMS6 1093 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 HPS5Q9UPZ3 1129 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 FRMPD2Q68DX3 1309 aaPredicted RBP9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 PASKQ96RG2 1323 aa9.23□□□□□ -0.93
HMGA1P4-201ENST00000428643 DOCK1Q14185 1865 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 CCDC196A0A1B0GTZ2 297 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 USP17L10C9JJH3 530 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 F5H6K3 240 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 DHX16O60231 1041 aaKnown RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 CDKL5O76039 1030 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 PARP1P09874 1014 aaKnown RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 GOLGA8HP0CJ92 632 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 PDHBP11177 359 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLC1A4P43007 532 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLC4A3P48751 1232 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 HUNKP57058 714 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 KLRC3Q07444 240 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 TROAPQ12815 778 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 GRM4Q14833 912 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 IFFO2Q5TF58 517 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 CST9Q5W186 159 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 CPLX2Q6PUV4 134 aaKnown RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 FANCBQ8NB91 859 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 DCAF4Q8WV16 495 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 CNKSR2Q8WXI2 1034 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 MKL1Q969V6 931 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 OPTNQ96CV9 577 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 SLC10A4Q96EP9 437 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 GMCL1Q96IK5 515 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 NUP88Q99567 741 aaPredicted RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 WDR18Q9BV38 432 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 KIAA1683Q9H0B3 1180 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 VCPKMTQ9H867 229 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 RBM28Q9NW13 759 aaKnown RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 ABT1Q9ULW3 272 aaKnown RBP9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 TMX2Q9Y320 296 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 NID2Q14112 1375 aa9.22□□□□□ -0.93
HMGA1P4-201ENST00000428643 GREB1LQ9C091 1923 aaPredicted RBP9.21□□□□□ -0.93
HMGA1P4-201ENST00000428643 UNCXA6NJT0 531 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 PLEKHA8P1O95397 391 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 GNAQP50148 359 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 USP14P54578 494 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 HMGCS2P54868 508 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 BACE1P56817 501 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 PPATQ06203 517 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 ST3GAL1Q11201 340 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 SCRN1Q12765 414 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 MKRN3Q13064 507 aaKnown RBP9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 IKQ13123 557 aaPredicted RBP9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 PPIL2Q13356 520 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 ASPRV1Q53RT3 343 aa9.21□□□□□ -0.94
HMGA1P4-201ENST00000428643 FAM83BQ5T0W9 1011 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms