RNA–Protein interactions for RNA: ENST00000428101.6

LMO1-202, Transcript of LIM domain only 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LMO1, Length 1,038 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-202ENST00000428101 TTC41PQ6P2S7 1318 aa32.7■■■□□ 2.82
LMO1-202ENST00000428101 RGS2P41220 211 aa32.69■■■□□ 2.82
LMO1-202ENST00000428101 COG2Q14746 738 aa32.69■■■□□ 2.82
LMO1-202ENST00000428101 PI4K2BQ8TCG2 481 aa32.69■■■□□ 2.82
LMO1-202ENST00000428101 ARHGEF10LQ9HCE6 1279 aa32.69■■■□□ 2.82
LMO1-202ENST00000428101 ARPP21Q9UBL0 812 aaPredicted RBP32.69■■■□□ 2.82
LMO1-202ENST00000428101 PRKAR2AP13861 404 aaKnown RBP32.68■■■□□ 2.82
LMO1-202ENST00000428101 CCL14Q16627 93 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 SBK1Q52WX2 424 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 TRMT44Q8IYL2 757 aaKnown RBP32.68■■■□□ 2.82
LMO1-202ENST00000428101 LPAR1Q92633 364 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 CRBNQ96SW2 442 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 TANGO6Q9C0B7 1094 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 HOXC10Q9NYD6 342 aa32.68■■■□□ 2.82
LMO1-202ENST00000428101 ZFYP08048 801 aaPredicted RBP32.67■■■□□ 2.82
LMO1-202ENST00000428101 ZKSCAN1P17029 563 aaPredicted RBP32.67■■■□□ 2.82
LMO1-202ENST00000428101 GIMAP6Q6P9H5 292 aa32.67■■■□□ 2.82
LMO1-202ENST00000428101 APBA2Q99767 749 aa32.67■■■□□ 2.82
LMO1-202ENST00000428101 VCPKMTQ9H867 229 aa32.67■■■□□ 2.82
LMO1-202ENST00000428101 CWC22Q9HCG8 908 aaKnown RBP32.67■■■□□ 2.82
LMO1-202ENST00000428101 PTPREP23469 700 aa32.66■■■□□ 2.82
LMO1-202ENST00000428101 MAP2K5Q13163 448 aa32.66■■■□□ 2.82
LMO1-202ENST00000428101 SPICE1Q8N0Z3 855 aa32.66■■■□□ 2.82
LMO1-202ENST00000428101 COLQQ9Y215 455 aaPredicted RBP32.66■■■□□ 2.82
LMO1-202ENST00000428101 A0A0G2JMZ2 1700 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 M0R2C6 588 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 GPAA1O43292 621 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 GLRX3O76003 335 aaKnown RBP32.65■■■□□ 2.82
LMO1-202ENST00000428101 CACNB2Q08289 660 aaPredicted RBP32.65■■■□□ 2.82
LMO1-202ENST00000428101 WDR78Q5VTH9 848 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 DIS3LQ8TF46 1054 aaKnown RBP32.65■■■□□ 2.82
LMO1-202ENST00000428101 PAWRQ96IZ0 340 aaKnown RBP32.65■■■□□ 2.82
LMO1-202ENST00000428101 GNL3Q9BVP2 549 aaKnown RBP eCLIP32.65■■■□□ 2.82
LMO1-202ENST00000428101 SH2D4AQ9H788 454 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 PARP14Q460N5 1801 aa32.65■■■□□ 2.82
LMO1-202ENST00000428101 SLC15A5A6NIM6 579 aa32.64■■■□□ 2.82
LMO1-202ENST00000428101 ERC2O15083 957 aa32.64■■■□□ 2.82
LMO1-202ENST00000428101 EEF2P13639 858 aaKnown RBP32.64■■■□□ 2.82
LMO1-202ENST00000428101 GREB1LQ9C091 1923 aaPredicted RBP32.64■■■□□ 2.82
LMO1-202ENST00000428101 KANSL2Q9H9L4 492 aa32.64■■■□□ 2.82
LMO1-202ENST00000428101 DSG3P32926 999 aa32.63■■■□□ 2.81
LMO1-202ENST00000428101 MNX1P50219 401 aaPredicted RBP32.63■■■□□ 2.81
LMO1-202ENST00000428101 GRB14Q14449 540 aa32.63■■■□□ 2.81
LMO1-202ENST00000428101 ANKLE1Q8NAG6 615 aa32.63■■■□□ 2.81
LMO1-202ENST00000428101 EPB41L4AQ9HCS5 686 aaPredicted RBP32.63■■■□□ 2.81
LMO1-202ENST00000428101 ALPK3Q96L96 1907 aa32.62■■■□□ 2.81
LMO1-202ENST00000428101 MOV10L1Q9BXT6 1211 aaKnown RBP32.62■■■□□ 2.81
LMO1-202ENST00000428101 FLRT1Q9NZU1 646 aa32.62■■■□□ 2.81
LMO1-202ENST00000428101 OGDHLQ9ULD0 1010 aa32.62■■■□□ 2.81
LMO1-202ENST00000428101 ROBO3Q96MS0 1386 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 SALL3Q9BXA9 1300 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 MINDY4BA8MYZ0 360 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 MX1P20591 662 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 RASA1P20936 1047 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 SPATC1LQ9H0A9 340 aa32.61■■■□□ 2.81
LMO1-202ENST00000428101 WDR46O15213 610 aaKnown RBP32.6■■■□□ 2.81
LMO1-202ENST00000428101 FLOT1O75955 427 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 HOXC6P09630 235 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 GNAT2P19087 354 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 CCND3P30281 292 aaPredicted RBP32.6■■■□□ 2.81
LMO1-202ENST00000428101 ATP2B2Q01814 1243 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 NECAB2Q7Z6G3 386 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 STK11IPQ8N1F8 1099 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 MB21D1Q8N884 522 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 ATG4CQ96DT6 458 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 SEC62Q99442 399 aaKnown RBP32.6■■■□□ 2.81
LMO1-202ENST00000428101 IVNS1ABPQ9Y6Y0 642 aa32.6■■■□□ 2.81
LMO1-202ENST00000428101 LRRFIP1Q32MZ4 808 aaKnown RBP32.59■■■□□ 2.81
LMO1-202ENST00000428101 NPLOC4Q8TAT6 608 aa32.59■■■□□ 2.81
LMO1-202ENST00000428101 YTHDC1Q96MU7 727 aaKnown RBP32.59■■■□□ 2.81
LMO1-202ENST00000428101 PATL2C9JE40 543 aaKnown RBP32.58■■■□□ 2.81
LMO1-202ENST00000428101 SHCBP1Q8NEM2 672 aa32.58■■■□□ 2.81
LMO1-202ENST00000428101 FSD1Q9BTV5 496 aa32.58■■■□□ 2.81
LMO1-202ENST00000428101 MKNK2Q9HBH9 465 aa32.58■■■□□ 2.81
LMO1-202ENST00000428101 NR2E3Q9Y5X4 410 aa32.58■■■□□ 2.81
LMO1-202ENST00000428101 COL11A1P12107 1806 aaPredicted RBP32.57■■■□□ 2.8
LMO1-202ENST00000428101 ERCC3P19447 782 aa32.57■■■□□ 2.8
LMO1-202ENST00000428101 TDO2P48775 406 aa32.57■■■□□ 2.8
LMO1-202ENST00000428101 ANKRD45Q5TZF3 282 aa32.57■■■□□ 2.8
LMO1-202ENST00000428101 LHX8Q68G74 356 aa32.57■■■□□ 2.8
LMO1-202ENST00000428101 RANBP2P49792 3224 aaKnown RBP32.56■■■□□ 2.8
LMO1-202ENST00000428101 TRIOBPQ9H2D6 2365 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 IGHA2P01877 340 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 APPP05067 770 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 HDAC1Q13547 482 aaPredicted RBP32.56■■■□□ 2.8
LMO1-202ENST00000428101 CHRDL2Q6WN34 429 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 IFNL3Q8IZI9 196 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 GOPCQ9HD26 462 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 ADAMTS5Q9UNA0 930 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 ZNF236Q9UL36 1845 aa32.56■■■□□ 2.8
LMO1-202ENST00000428101 EVI5O60447 810 aa32.55■■■□□ 2.8
LMO1-202ENST00000428101 ZMYM1Q5SVZ6 1142 aa32.55■■■□□ 2.8
LMO1-202ENST00000428101 MFSD14CQ5VZR4 134 aa32.55■■■□□ 2.8
LMO1-202ENST00000428101 NBPF3Q9H094 633 aa32.55■■■□□ 2.8
LMO1-202ENST00000428101 FBXO28Q9NVF7 368 aa32.55■■■□□ 2.8
LMO1-202ENST00000428101 STRNO43815 780 aa32.54■■■□□ 2.8
LMO1-202ENST00000428101 PLS1Q14651 629 aa32.54■■■□□ 2.8
LMO1-202ENST00000428101 SAMD1Q6SPF0 538 aaPredicted RBP32.54■■■□□ 2.8
LMO1-202ENST00000428101 ADORA2AP29274 412 aa32.53■■■□□ 2.8
LMO1-202ENST00000428101 FXR1P51114 621 aaKnown RBP eCLIP32.53■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 92 ms