RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PCF11O94913 1555 aaKnown RBP8.81□□□□□ -1
C9orf3-205ENST00000427193 PHC3Q8NDX5 983 aa8.8□□□□□ -1
C9orf3-205ENST00000427193 JARID2Q92833 1246 aaPredicted RBP8.8□□□□□ -1
C9orf3-205ENST00000427193 ACSF2Q96CM8 615 aaPredicted RBP8.8□□□□□ -1
C9orf3-205ENST00000427193 USP31Q70CQ4 1352 aa8.8□□□□□ -1
C9orf3-205ENST00000427193 UHRF1BP1LA0JNW5 1464 aa8.8□□□□□ -1
C9orf3-205ENST00000427193 CARMIL1Q5VZK9 1371 aa8.79□□□□□ -1
C9orf3-205ENST00000427193 XPCQ01831 940 aaPredicted RBP8.79□□□□□ -1
C9orf3-205ENST00000427193 MPZL3Q6UWV2 235 aa8.79□□□□□ -1
C9orf3-205ENST00000427193 TMC4Q7Z404 712 aa8.79□□□□□ -1
C9orf3-205ENST00000427193 DNAJB8Q8NHS0 232 aa8.79□□□□□ -1
C9orf3-205ENST00000427193 CEP131Q9UPN4 1083 aa8.79□□□□□ -1
C9orf3-205ENST00000427193 SPATA31D1Q6ZQQ2 1576 aa8.78□□□□□ -1
C9orf3-205ENST00000427193 TNIKQ9UKE5 1360 aa8.78□□□□□ -1
C9orf3-205ENST00000427193 PPP1R16BQ96T49 567 aa8.78□□□□□ -1
C9orf3-205ENST00000427193 SLAMF8Q9P0V8 285 aa8.78□□□□□ -1
C9orf3-205ENST00000427193 KIF21BO75037 1637 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 BPNT1O95861 308 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 CTSHP09668 335 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 DNAJC14Q6Y2X3 702 aaPredicted RBP8.77□□□□□ -1.01
C9orf3-205ENST00000427193 AEBP1Q8IUX7 1158 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 CYB5D2Q8WUJ1 264 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 Q96M66 194 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 TRIT1Q9H3H1 467 aaKnown RBP8.77□□□□□ -1.01
C9orf3-205ENST00000427193 RAPGEF2Q9Y4G8 1499 aa8.77□□□□□ -1.01
C9orf3-205ENST00000427193 KDM5BQ9UGL1 1544 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 CILPO75339 1184 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 ESR1P03372 595 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 RAC2P15153 192 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 PLCG1P19174 1290 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 YARSP54577 528 aaKnown RBP8.76□□□□□ -1.01
C9orf3-205ENST00000427193 HSPA2P54652 639 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 LMNB2Q03252 620 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 TMEM201Q5SNT2 666 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 LCE1DQ5T752 114 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 PRR23BQ6ZRT6 265 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 CRELD1Q96HD1 420 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 TMEM59LQ9UK28 342 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 UACAQ9BZF9 1416 aa8.76□□□□□ -1.01
C9orf3-205ENST00000427193 TTBK1Q5TCY1 1321 aaPredicted RBP8.76□□□□□ -1.01
C9orf3-205ENST00000427193 CUL7Q14999 1698 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 TSPAN15O95858 294 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 TTC6Q86TZ1 520 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 FAM13CQ8NE31 585 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 PPP1R13LQ8WUF5 828 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 GATAD2BQ8WXI9 593 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 DUSP15Q9H1R2 295 aaPredicted RBP8.75□□□□□ -1.01
C9orf3-205ENST00000427193 CORINQ9Y5Q5 1042 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 ADAMTSL3P82987 1691 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 MAGI3Q5TCQ9 1506 aa8.75□□□□□ -1.01
C9orf3-205ENST00000427193 FAM221AA4D161 298 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 TPP2P29144 1249 aaPredicted RBP8.74□□□□□ -1.01
C9orf3-205ENST00000427193 RAP1GAPP47736 663 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 CAMK2GQ13555 558 aaPredicted RBP8.74□□□□□ -1.01
C9orf3-205ENST00000427193 KRTAP19-4Q3LI73 84 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 BNC2Q6ZN30 1099 aaPredicted RBP8.74□□□□□ -1.01
C9orf3-205ENST00000427193 FBXO33Q7Z6M2 555 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 FAM9AQ8IZU1 332 aaPredicted RBP8.74□□□□□ -1.01
C9orf3-205ENST00000427193 GPR62Q9BZJ7 368 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 GPATCH2Q9NW75 528 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 KCNH3Q9ULD8 1083 aa8.74□□□□□ -1.01
C9orf3-205ENST00000427193 GOLGA3Q08378 1498 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 DNAJC25-GNG10A0A024R161 153 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 SORBS3O60504 671 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 SRFP11831 508 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 ITGAEP38570 1179 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 GAB4Q2WGN9 574 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 RALGPS1Q5JS13 557 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 CREG2Q8IUH2 290 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 SLFN12Q8IYM2 578 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 ABHD4Q8TB40 342 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 RHOVQ96L33 236 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 FAM161BQ96MY7 647 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 PRR36Q9H6K5 1346 aa8.73□□□□□ -1.01
C9orf3-205ENST00000427193 CD109Q6YHK3 1445 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 UPK3BL1B0FP48 263 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 UPK3BL2E5RIL1 263 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 RBAK-RBAKDNI3L0D1 243 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 PF4P02776 101 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 PDIA4P13667 645 aaKnown RBP8.72□□□□□ -1.01
C9orf3-205ENST00000427193 PWP1Q13610 501 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 SPOCD1Q6ZMY3 1216 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 SYDE1Q6ZW31 735 aaPredicted RBP8.72□□□□□ -1.01
C9orf3-205ENST00000427193 RELL1Q8IUW5 271 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 DTWD2Q8NBA8 298 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 FBXO15Q8NCQ5 510 aaPredicted RBP8.72□□□□□ -1.01
C9orf3-205ENST00000427193 RNF141Q8WVD5 230 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 TOX2Q96NM4 488 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 RSRP1Q9BUV0 290 aa8.72□□□□□ -1.01
C9orf3-205ENST00000427193 WDR7Q9Y4E6 1490 aa8.71□□□□□ -1.01
C9orf3-205ENST00000427193 WASH4PA8MWX3 477 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 F13A1P00488 732 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 HPXP02790 462 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 TSPYL5Q86VY4 417 aaPredicted RBP8.71□□□□□ -1.02
C9orf3-205ENST00000427193 CILP2Q8IUL8 1156 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 MYLIPQ8WY64 445 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 TMEM74Q96NL1 305 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 MRS2Q9HD23 443 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 DUSP13Q9UII6 198 aa8.71□□□□□ -1.02
C9orf3-205ENST00000427193 LOC105371045A0A1W2PR82 267 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms