RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 CARD6Q9BX69 1037 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 IFT122Q9HBG6 1241 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 SART1O43290 800 aaKnown RBP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 S100BP04271 92 aaPredicted RBP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 LONRF2Q1L5Z9 754 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 NOD1Q9Y239 953 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 PFDN1O60925 122 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 RNF8O76064 485 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 GSTA1P08263 222 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 GSTA2P09210 222 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 IL9RQ01113 521 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 NELFBQ8WX92 580 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 PIK3C2GO75747 1445 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 NOS1P29475 1434 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 PRPF6O94906 941 aaKnown RBP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 TRIM11Q96F44 468 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 ZBTB21Q9ULJ3 1066 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 USP26Q9BXU7 913 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 LPXNO60711 386 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 PUM3Q15397 648 aaKnown RBP15.87■□□□□ 0.13
PTPN13-203ENST00000427191 RABEP2Q9H5N1 569 aa15.87■□□□□ 0.13
PTPN13-203ENST00000427191 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 F8W8V4 182 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 MMEL1Q495T6 779 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 RAB44Q7Z6P3 723 aaPredicted RBP15.86■□□□□ 0.13
PTPN13-203ENST00000427191 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
PTPN13-203ENST00000427191 EXOC3O60645 756 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 AKNAD1Q5T1N1 836 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 ZBTB9Q96C00 473 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 CCPG1Q9ULG6 757 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 ANGPTL3Q9Y5C1 460 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 KIFC3Q9BVG8 833 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 CNOT10Q9H9A5 744 aaKnown RBP15.86■□□□□ 0.13
PTPN13-203ENST00000427191 STK38LQ9Y2H1 464 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 IRX5P78411 483 aaPredicted RBP15.86■□□□□ 0.13
PTPN13-203ENST00000427191 CDR2Q01850 454 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 RAD51AP2Q09MP3 1159 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 CEP85Q6P2H3 762 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 NIP7Q9Y221 180 aaKnown RBP eCLIP15.86■□□□□ 0.13
PTPN13-203ENST00000427191 GCNT3O95395 438 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 SLMAPQ14BN4 828 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 GALNT17Q6IS24 598 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 EFCAB13Q8IY85 973 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 EFCC1Q9HA90 598 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 TXLNGQ9NUQ3 528 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 ZNF174Q15697 407 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 FBXO41Q8TF61 875 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 PCDHB13Q9Y5F0 798 aa15.86■□□□□ 0.13
PTPN13-203ENST00000427191 SERPINB6P35237 376 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 PRPSAP1Q14558 356 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 LRRC8CQ8TDW0 803 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 KRIT1O00522 736 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 TRIM31Q9BZY9 425 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 COPS6Q7L5N1 327 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 VEZTQ9HBM0 779 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 KDM5AP29375 1690 aaKnown RBP15.85■□□□□ 0.13
PTPN13-203ENST00000427191 ZC4H2Q9NQZ6 224 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 PLCH2O75038 1416 aa15.85■□□□□ 0.13
PTPN13-203ENST00000427191 NR1I2O75469 434 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 C8orf34Q49A92 452 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 RASIP1Q5U651 963 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 NFE2L3Q9Y4A8 694 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 ABCC1P33527 1531 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 KLHL7Q8IXQ5 586 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 CXorf38Q8TB03 319 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 SCINQ9Y6U3 715 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 PARP10Q53GL7 1025 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 EIF4G3O43432 1585 aaKnown RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 TRIM68Q6AZZ1 485 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 SLFN12Q8IYM2 578 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 MYCT1Q8N699 235 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 OR8K1Q8NGG5 319 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 CEBPAP49715 358 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 DIXDC1Q155Q3 683 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 PROCA1Q8NCQ7 364 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 HOXB7P09629 217 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 NXNQ6DKJ4 435 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 SPDL1Q96EA4 605 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 METTL14Q9HCE5 456 aaKnown RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 SLC5A4Q9NY91 659 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 ADCY8P40145 1251 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 HERC4Q5GLZ8 1057 aaPredicted RBP15.84■□□□□ 0.13
PTPN13-203ENST00000427191 PLEKHM2Q8IWE5 1019 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 CTAGE3PQ8IX95 158 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 CFAP61Q8NHU2 1237 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 TRIM15Q9C019 465 aa15.84■□□□□ 0.13
PTPN13-203ENST00000427191 CENPKQ9BS16 269 aa15.83■□□□□ 0.13
PTPN13-203ENST00000427191 HAUS4Q9H6D7 363 aa15.83■□□□□ 0.13
PTPN13-203ENST00000427191 LRWD1Q9UFC0 647 aa15.83■□□□□ 0.13
PTPN13-203ENST00000427191 KDM5BQ9UGL1 1544 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 SNX29Q8TEQ0 813 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 TTC1Q99614 292 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 PCDH11XQ9BZA7 1347 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 PCDH11YQ9BZA8 1340 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
PTPN13-203ENST00000427191 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms