RNA–Protein interactions for RNA: ENST00000426530.2

PTPMT1-203, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 1,014 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-203ENST00000426530 LBX2Q6XYB7 198 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 GCC1Q96CN9 775 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 CCDC17Q96LX7 622 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 CRISPLD2Q9H0B8 497 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 HMX1Q9NP08 348 aaPredicted RBP29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 PARP14Q460N5 1801 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 TTC41PQ6P2S7 1318 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 RPTORQ8N122 1335 aa29.96■■■□□ 2.39
PTPMT1-203ENST00000426530 GPAA1O43292 621 aa29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 PRKAR2AP13861 404 aaKnown RBP29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 ZKSCAN1P17029 563 aaPredicted RBP29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 RGS2P41220 211 aa29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 CCNA1P78396 465 aa29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 ATP2B2Q01814 1243 aa29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 DIS3LQ8TF46 1054 aaKnown RBP29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 EPB41L4AQ9HCS5 686 aaPredicted RBP29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 TMX2Q9Y320 296 aa29.95■■■□□ 2.39
PTPMT1-203ENST00000426530 XRCC5P13010 732 aaKnown RBP29.94■■■□□ 2.38
PTPMT1-203ENST00000426530 HTATIP2Q9BUP3 242 aa29.94■■■□□ 2.38
PTPMT1-203ENST00000426530 GREB1LQ9C091 1923 aaPredicted RBP29.94■■■□□ 2.38
PTPMT1-203ENST00000426530 ALPK3Q96L96 1907 aa29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 MINDY4BA8MYZ0 360 aa29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 ZFYP08048 801 aaPredicted RBP29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 EEF2P13639 858 aaKnown RBP29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 COG2Q14746 738 aa29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 HABP4Q5JVS0 413 aaKnown RBP29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 SAMD1Q6SPF0 538 aaPredicted RBP29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 SEC62Q99442 399 aaKnown RBP29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 APBA2Q99767 749 aa29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 VCPKMTQ9H867 229 aa29.93■■■□□ 2.38
PTPMT1-203ENST00000426530 MAP2K5Q13163 448 aa29.92■■■□□ 2.38
PTPMT1-203ENST00000426530 MAP3K21Q5TCX8 1036 aa29.92■■■□□ 2.38
PTPMT1-203ENST00000426530 PAWRQ96IZ0 340 aaKnown RBP29.92■■■□□ 2.38
PTPMT1-203ENST00000426530 ERC2O15083 957 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 FLOT1O75955 427 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 MX1P20591 662 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 CACNB2Q08289 660 aaPredicted RBP29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 SBK1Q52WX2 424 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 FSD1Q9BTV5 496 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 SH2D4AQ9H788 454 aa29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 COLQQ9Y215 455 aaPredicted RBP29.91■■■□□ 2.38
PTPMT1-203ENST00000426530 COL11A1P12107 1806 aaPredicted RBP29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 GLRX3O76003 335 aaKnown RBP29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 PTPREP23469 700 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 TDO2P48775 406 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 LPAR1Q92633 364 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 ATG4CQ96DT6 458 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 MOV10L1Q9BXT6 1211 aaKnown RBP29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 FLRT1Q9NZU1 646 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 ROBO3Q96MS0 1386 aa29.9■■■□□ 2.38
PTPMT1-203ENST00000426530 APPP05067 770 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 RASA1P20936 1047 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 ANKRD45Q5TZF3 282 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 KANSL2Q9H9L4 492 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 HOXC10Q9NYD6 342 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 IVNS1ABPQ9Y6Y0 642 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 SALL3Q9BXA9 1300 aa29.89■■■□□ 2.38
PTPMT1-203ENST00000426530 SLC15A5A6NIM6 579 aa29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 RAD21O60216 631 aa29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 CCND3P30281 292 aaPredicted RBP29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 DSG3P32926 999 aa29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 GIMAP6Q6P9H5 292 aa29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 TRMT44Q8IYL2 757 aaKnown RBP29.88■■■□□ 2.37
PTPMT1-203ENST00000426530 FRMPD3Q5JV73 1810 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 GRB14Q14449 540 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 PLS1Q14651 629 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 SPATC1LQ9H0A9 340 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 MKNK2Q9HBH9 465 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 FBXO28Q9NVF7 368 aa29.87■■■□□ 2.37
PTPMT1-203ENST00000426530 WDR46O15213 610 aaKnown RBP29.86■■■□□ 2.37
PTPMT1-203ENST00000426530 GNAT2P19087 354 aa29.86■■■□□ 2.37
PTPMT1-203ENST00000426530 NPLOC4Q8TAT6 608 aa29.86■■■□□ 2.37
PTPMT1-203ENST00000426530 ZBTB47Q9UFB7 747 aaPredicted RBP29.86■■■□□ 2.37
PTPMT1-203ENST00000426530 ZNF236Q9UL36 1845 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 PRDM1O75626 825 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 ERCC3P19447 782 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 MNX1P50219 401 aaPredicted RBP29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 LRRFIP1Q32MZ4 808 aaKnown RBP29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 CHRDL2Q6WN34 429 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 NECAB2Q7Z6G3 386 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 IFNL3Q8IZI9 196 aa29.85■■■□□ 2.37
PTPMT1-203ENST00000426530 MYH4Q9Y623 1939 aa29.84■■■□□ 2.37
PTPMT1-203ENST00000426530 ZMYM1Q5SVZ6 1142 aa29.84■■■□□ 2.37
PTPMT1-203ENST00000426530 OGDHLQ9ULD0 1010 aa29.84■■■□□ 2.37
PTPMT1-203ENST00000426530 PATL2C9JE40 543 aaKnown RBP29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 FAM83BQ5T0W9 1011 aa29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 CCDC129Q6ZRS4 1044 aa29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 ANKLE1Q8NAG6 615 aa29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 GOPCQ9HD26 462 aa29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 TRIOBPQ9H2D6 2365 aa29.83■■■□□ 2.37
PTPMT1-203ENST00000426530 EVI5O60447 810 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 CAPN2P17655 700 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 ADORA2AP29274 412 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 HDAC1Q13547 482 aaPredicted RBP29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 NCAPG2Q86XI2 1143 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 MB21D1Q8N884 522 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 NUP88Q99567 741 aaPredicted RBP29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 NR2E3Q9Y5X4 410 aa29.82■■■□□ 2.36
PTPMT1-203ENST00000426530 HOXC6P09630 235 aa29.81■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms