RNA–Protein interactions for RNA: ENST00000426385.3

PMP22-204, Transcript of peripheral myelin protein 22, humanhuman

TSL 2 BASIC

Gene PMP22, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-204ENST00000426385 C12orf42Q96LP6 360 aa11.3□□□□□ -0.6
PMP22-204ENST00000426385 COL25A1Q9BXS0 654 aaPredicted RBP11.3□□□□□ -0.6
PMP22-204ENST00000426385 ARPP21Q9UBL0 812 aaPredicted RBP11.3□□□□□ -0.6
PMP22-204ENST00000426385 TACC3Q9Y6A5 838 aa11.3□□□□□ -0.6
PMP22-204ENST00000426385 MYH4Q9Y623 1939 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 TNPO2O14787 897 aaKnown RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 CNMDO75829 334 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 RASA1P20936 1047 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 TDO2P48775 406 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 HERVK_113P62684 666 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 IRX3P78415 501 aaPredicted RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 AAMPQ13685 434 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 USP17L2Q6R6M4 530 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 SKAP1Q86WV1 359 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 IFNL3Q8IZI9 196 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 SPICE1Q8N0Z3 855 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 GDF15Q99988 308 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 KIAA1683Q9H0B3 1180 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 INCENPQ9NQS7 918 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 GINM1Q9NU53 330 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 RBPJLQ9UBG7 517 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 ZBTB47Q9UFB7 747 aaPredicted RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 SWAP70Q9UH65 585 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 PNMA3Q9UL41 463 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 COL11A1P12107 1806 aaPredicted RBP11.29□□□□□ -0.6
PMP22-204ENST00000426385 LAMA4Q16363 1823 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 DOCK3Q8IZD9 2030 aa11.29□□□□□ -0.6
PMP22-204ENST00000426385 C19orf81C9J6K1 198 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 APPP05067 770 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 HOXA7P31268 230 aaPredicted RBP11.28□□□□□ -0.6
PMP22-204ENST00000426385 ICA1Q05084 483 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 FAM110CQ1W6H9 321 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 Q3C1V9 767 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 SBK1Q52WX2 424 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 TMEM179Q6ZVK1 233 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 EVI5LQ96CN4 794 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 PAGR1Q9BTK6 254 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 PORCNQ9H237 461 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 RPAP3Q9H6T3 665 aaPredicted RBP11.28□□□□□ -0.6
PMP22-204ENST00000426385 CABP5Q9NP86 173 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 MTMR10Q9NXD2 777 aa11.28□□□□□ -0.6
PMP22-204ENST00000426385 TRIM6-TRIM34B2RNG4 842 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 EEF2P13639 858 aaKnown RBP11.27□□□□□ -0.61
PMP22-204ENST00000426385 GSPT1P15170 499 aaKnown RBP11.27□□□□□ -0.61
PMP22-204ENST00000426385 MAGEA10P43363 369 aaPredicted RBP11.27□□□□□ -0.61
PMP22-204ENST00000426385 ATP2B2Q01814 1243 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 CTDSPL2Q05D32 466 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 TRIM32Q13049 653 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 RILPL2Q969X0 211 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 DDRGK1Q96HY6 314 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 FAM161BQ96MY7 647 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 IL25Q9H293 177 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 BTBD7Q9P203 1132 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 MORF4L1Q9UBU8 362 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 STXBP5LQ9Y2K9 1186 aa11.27□□□□□ -0.61
PMP22-204ENST00000426385 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 PATL2C9JE40 543 aaKnown RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 BMP8BP34820 402 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 GCLCP48506 637 aaPredicted RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 PPARAQ07869 468 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 PABPC4Q13310 644 aaKnown RBP eCLIP11.26□□□□□ -0.61
PMP22-204ENST00000426385 GIMAP6Q6P9H5 292 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 CATSPERGQ6ZRH7 1159 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 AMOTL1Q8IY63 956 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 NUP88Q99567 741 aaPredicted RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 UBE2OQ9C0C9 1292 aaKnown RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 CRISPLD2Q9H0B8 497 aa11.26□□□□□ -0.61
PMP22-204ENST00000426385 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.26□□□□□ -0.61
PMP22-204ENST00000426385 PAK6Q9NQU5 681 aaPredicted RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 LAMA2P24043 3122 aaKnown RBP11.26□□□□□ -0.61
PMP22-204ENST00000426385 ALPK3Q96L96 1907 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 IGKV6D-41A0A0C4DH26 115 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L15C9J2P7 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L13C9JLJ4 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L11C9JVI0 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L18D6R9N7 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L22D6RA61 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L17D6RBQ6 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L19D6RCP7 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L20D6RJB6 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 GNAT2P19087 354 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP14P54578 494 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 ERVK-9P63128 1117 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 ERVK-24P63145 666 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 USP17L24Q0WX57 530 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 FAM47AQ5JRC9 791 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 SAMD1Q6SPF0 538 aaPredicted RBP11.25□□□□□ -0.61
PMP22-204ENST00000426385 PXYLP1Q8TE99 480 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 COA7Q96BR5 231 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 CHMP4CQ96CF2 233 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 TANGO6Q9C0B7 1094 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 NAPBQ9H115 298 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 OSBPL3Q9H4L5 887 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 FBXO28Q9NVF7 368 aa11.25□□□□□ -0.61
PMP22-204ENST00000426385 TMX2Q9Y320 296 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms