RNA–Protein interactions for RNA: ENST00000426180.1

HERPUD2-204, Transcript of HERPUD family member 2, humanhuman

TSL 5

Gene HERPUD2, Length 757 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-204ENST00000426180 HTRA3P83110 453 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 SHROOM1Q2M3G4 852 aaPredicted RBP6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 CTC1Q2NKJ3 1217 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 BRICD5Q6PL45 260 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 CERS3Q8IU89 383 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 STK11IPQ8N1F8 1099 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 SLC44A5Q8NCS7 719 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 NLRP7Q8WX94 980 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 CSRNP1Q96S65 589 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 LSG1Q9H089 658 aaKnown RBP6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 INCENPQ9NQS7 918 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 TAF6LQ9Y6J9 622 aa6.83□□□□□ -1.32
HERPUD2-204ENST00000426180 RAD50Q92878 1312 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 DDX60LQ5H9U9 1706 aaKnown RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 MYH7P12883 1935 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 COL2A1P02458 1487 aaPredicted RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 TTC24A2A3L6 582 aaPredicted RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 PHF20L1A8MW92 1017 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 MINDY4BA8MYZ0 360 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 USP2O75604 605 aaPredicted RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 POLR3DP05423 398 aaPredicted RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 GNAT2P19087 354 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 TDO2P48775 406 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 HAND2P61296 217 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 MAP3K10Q02779 954 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 CTDSPL2Q05D32 466 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 GABPAQ06546 454 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 ALX1Q15699 326 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 C8orf34Q49A92 452 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 SBK1Q52WX2 424 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 LCE2AQ5TA79 106 aaPredicted RBP6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 C12orf60Q5U649 245 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 GIMAP6Q6P9H5 292 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 RUFY2Q8WXA3 655 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 ECM29Q5VYK3 1845 aa6.82□□□□□ -1.32
HERPUD2-204ENST00000426180 CDK5RAP2Q96SN8 1893 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 SIPA1L1O43166 1804 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PRDM1O75626 825 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 INPP5BP32019 993 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 SHMT1P34896 483 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 MFAP1P55081 439 aaKnown RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PPARAQ07869 468 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 TTLL12Q14166 644 aaPredicted RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 SUPT20HL1Q3ZLR7 823 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 TTC6Q86TZ1 520 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 METTL16Q86W50 562 aaKnown RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 TBC1D10CQ8IV04 446 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 MAP4K1Q92918 833 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 ZKSCAN4Q969J2 545 aaPredicted RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 CLMNQ96JQ2 1002 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PHOX2BQ99453 314 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 DSCC1Q9BVC3 393 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 NACAP1Q9BZK3 213 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 NAPBQ9H115 298 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 DHX36Q9H2U1 1008 aaKnown RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 GBA2Q9HCG7 927 aaPredicted RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 ANO2Q9NQ90 1003 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PRDM9Q9NQV7 894 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 GMPR2Q9P2T1 348 aaKnown RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 PI4KBQ9UBF8 816 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 ARPP21Q9UBL0 812 aaPredicted RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 ZNF112Q9UJU3 913 aa6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 ANGEL1Q9UNK9 670 aaKnown RBP6.81□□□□□ -1.32
HERPUD2-204ENST00000426180 FOCADQ5VW36 1801 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 TMEM88BA6NKF7 163 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 GPR37O15354 613 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 GDF11O95390 407 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 HLA-DOAP06340 250 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 NF2P35240 595 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 CDK8P49336 464 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 SMCPP49901 116 aaPredicted RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 C1QTNF8P60827 252 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 COL9A3Q14050 684 aaPredicted RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 MAP3K11Q16584 847 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 MSS51Q4VC12 460 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 LDLRAD1Q5T700 205 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 TATDN1Q6P1N9 297 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 CASC1Q6TDU7 716 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 C16orf86Q6ZW13 317 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 CCDC84Q86UT8 332 aaPredicted RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 FOXP4Q8IVH2 680 aaPredicted RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 CRACR2BQ8N4Y2 399 aaPredicted RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 C2orf69Q8N8R5 385 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 NAV1Q8NEY1 1877 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 KLRG1Q96E93 195 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 WRNIP1Q96S55 665 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 ZNF341Q9BYN7 854 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 EHD4Q9H223 541 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 SERPINB13Q9UIV8 391 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 RBM8AQ9Y5S9 174 aaKnown RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 SNCAIPQ9Y6H5 919 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 POLR2AP24928 1970 aaKnown RBP6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 ROBO3Q96MS0 1386 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 AK9Q5TCS8 1911 aa6.8□□□□□ -1.32
HERPUD2-204ENST00000426180 ZMYM6O95789 1325 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms