RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 SIPA1L1O43166 1804 aa30.55■■■□□ 2.48
LDB1-202ENST00000425280 TOB1P50616 345 aaPredicted RBP30.55■■■□□ 2.48
LDB1-202ENST00000425280 SNW1Q13573 536 aaKnown RBP30.55■■■□□ 2.48
LDB1-202ENST00000425280 ENGASEQ8NFI3 743 aa30.55■■■□□ 2.48
LDB1-202ENST00000425280 PIBF1Q8WXW3 757 aa30.55■■■□□ 2.48
LDB1-202ENST00000425280 DHX36Q9H2U1 1008 aaKnown RBP30.55■■■□□ 2.48
LDB1-202ENST00000425280 MTMR4Q9NYA4 1195 aa30.55■■■□□ 2.48
LDB1-202ENST00000425280 PSMD14O00487 310 aa30.54■■■□□ 2.48
LDB1-202ENST00000425280 VIL1P09327 827 aaKnown RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 SLC35G1Q2M3R5 365 aa30.54■■■□□ 2.48
LDB1-202ENST00000425280 MRPS27Q92552 414 aaKnown RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 VEGFAP15692 232 aaPredicted RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 KRT2P35908 639 aa30.54■■■□□ 2.48
LDB1-202ENST00000425280 FAM160A1Q05DH4 1040 aa30.54■■■□□ 2.48
LDB1-202ENST00000425280 AXDND1Q5T1B0 1012 aaPredicted RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 RBM43Q6ZSC3 357 aaKnown RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 TDRD3Q9H7E2 651 aaKnown RBP30.54■■■□□ 2.48
LDB1-202ENST00000425280 DDTLA6NHG4 134 aaPredicted RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 R3HDM1Q15032 1099 aaKnown RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 NPY5RQ15761 445 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 RNF214Q8ND24 703 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 GMLQ99445 158 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 GOLGB1Q14789 3259 aaKnown RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 PPP6R2O75170 966 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 MARCKSP29966 332 aaPredicted RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 DALRD3Q5D0E6 543 aaKnown RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 RILPL1Q5EBL4 403 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 SH3BP5LQ7L8J4 393 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 RASGRP2Q7LDG7 609 aa30.53■■■□□ 2.48
LDB1-202ENST00000425280 PRMT6Q96LA8 375 aaPredicted RBP30.53■■■□□ 2.48
LDB1-202ENST00000425280 SLURP2P0DP57 97 aa30.52■■■□□ 2.48
LDB1-202ENST00000425280 LZTS2Q9BRK4 669 aa30.52■■■□□ 2.48
LDB1-202ENST00000425280 DNAJC18Q9H819 358 aa30.52■■■□□ 2.48
LDB1-202ENST00000425280 BRCA1P38398 1863 aaKnown RBP30.52■■■□□ 2.48
LDB1-202ENST00000425280 CYTH3O43739 400 aa30.51■■■□□ 2.48
LDB1-202ENST00000425280 GOLGA8HP0CJ92 632 aa30.51■■■□□ 2.47
LDB1-202ENST00000425280 CKAP2LQ8IYA6 745 aa30.51■■■□□ 2.47
LDB1-202ENST00000425280 GREB1LQ9C091 1923 aaPredicted RBP30.5■■■□□ 2.47
LDB1-202ENST00000425280 PARP1P09874 1014 aaKnown RBP30.5■■■□□ 2.47
LDB1-202ENST00000425280 NIM1KQ8IY84 436 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 JMYQ8N9B5 988 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 BRMS1Q9HCU9 246 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 CABP5Q9NP86 173 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.5■■■□□ 2.47
LDB1-202ENST00000425280 PI4KBQ9UBF8 816 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 ZNRF3Q9ULT6 936 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 A0A1B0GVL5 298 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 KLRF2D3W0D1 207 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 FMR1NBQ8N0W7 255 aaPredicted RBP30.5■■■□□ 2.47
LDB1-202ENST00000425280 TNFRSF25Q93038 417 aa30.5■■■□□ 2.47
LDB1-202ENST00000425280 USP17L2Q6R6M4 530 aa30.49■■■□□ 2.47
LDB1-202ENST00000425280 CLEC10AQ8IUN9 316 aa30.49■■■□□ 2.47
LDB1-202ENST00000425280 ZSCAN29Q8IWY8 852 aaPredicted RBP30.49■■■□□ 2.47
LDB1-202ENST00000425280 CCDC192P0DO97 292 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 NDUFA8P51970 172 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 EARS2Q5JPH6 523 aaKnown RBP30.48■■■□□ 2.47
LDB1-202ENST00000425280 SPZ1Q9BXG8 430 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 PPP1R1BQ9UD71 204 aaPredicted RBP30.48■■■□□ 2.47
LDB1-202ENST00000425280 FAM205CA6NFA0 338 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 KINO60870 393 aaKnown RBP30.48■■■□□ 2.47
LDB1-202ENST00000425280 ENTPD3O75355 529 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 CMA1P23946 247 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 NLRP5P59047 1200 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 CCDC17Q96LX7 622 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 SH3GLB2Q9NR46 395 aa30.48■■■□□ 2.47
LDB1-202ENST00000425280 ZBTB12Q9Y330 459 aaPredicted RBP30.48■■■□□ 2.47
LDB1-202ENST00000425280 FER1L6Q2WGJ9 1857 aa30.47■■■□□ 2.47
LDB1-202ENST00000425280 USP17L5A8MUK1 530 aa30.47■■■□□ 2.47
LDB1-202ENST00000425280 TTLL1O95922 423 aa30.47■■■□□ 2.47
LDB1-202ENST00000425280 EIF6P56537 245 aaKnown RBP30.47■■■□□ 2.47
LDB1-202ENST00000425280 GPKOWQ92917 476 aaPredicted RBP eCLIP30.47■■■□□ 2.47
LDB1-202ENST00000425280 SGIP1Q9BQI5 828 aa30.47■■■□□ 2.47
LDB1-202ENST00000425280 PCDHB6Q9Y5E3 794 aa30.47■■■□□ 2.47
LDB1-202ENST00000425280 SPDYE2BA6NHP3 402 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 FAM196BA6NMK8 535 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 SPDYE6P0CI01 402 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 LRRC47Q8N1G4 583 aaKnown RBP30.46■■■□□ 2.47
LDB1-202ENST00000425280 CLIP2Q9UDT6 1046 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 MPHOSPH10O00566 681 aaKnown RBP30.46■■■□□ 2.47
LDB1-202ENST00000425280 CPVLQ9H3G5 476 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 HDAC9Q9UKV0 1011 aa30.46■■■□□ 2.47
LDB1-202ENST00000425280 ATRNL1Q5VV63 1379 aa30.45■■■□□ 2.47
LDB1-202ENST00000425280 PDHBP11177 359 aa30.45■■■□□ 2.47
LDB1-202ENST00000425280 CTAGE5O15320 804 aa30.45■■■□□ 2.46
LDB1-202ENST00000425280 TYRO3Q06418 890 aa30.45■■■□□ 2.46
LDB1-202ENST00000425280 FOXP4Q8IVH2 680 aaPredicted RBP30.45■■■□□ 2.46
LDB1-202ENST00000425280 ANP32BQ92688 251 aaKnown RBP30.45■■■□□ 2.46
LDB1-202ENST00000425280 TAOK3Q9H2K8 898 aa30.45■■■□□ 2.46
LDB1-202ENST00000425280 CUTAO60888 179 aa30.44■■■□□ 2.46
LDB1-202ENST00000425280 SMARCA1P28370 1054 aa30.44■■■□□ 2.46
LDB1-202ENST00000425280 NOM1Q5C9Z4 860 aaKnown RBP30.44■■■□□ 2.46
LDB1-202ENST00000425280 COL2A1P02458 1487 aaPredicted RBP30.44■■■□□ 2.46
LDB1-202ENST00000425280 ATP2B1P20020 1258 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 WWC2Q6AWC2 1192 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 SHC4Q6S5L8 630 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 METTL16Q86W50 562 aaKnown RBP30.43■■■□□ 2.46
LDB1-202ENST00000425280 OGFOD1Q8N543 542 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 CLIC6Q96NY7 704 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 ADAMTS3O15072 1205 aa30.43■■■□□ 2.46
LDB1-202ENST00000425280 SNHG28P0DPA3 235 aa30.43■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms