RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FAM221AA4D161 298 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
LINC01040-201ENST00000425048 NR0B2Q15466 257 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 GATAD2BQ8WXI9 593 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 CWC22Q9HCG8 908 aaKnown RBP8.99□□□□□ -0.97
LINC01040-201ENST00000425048 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 TTLL10Q6ZVT0 673 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 IRF2BP1Q8IU81 584 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 CCDC74BQ96LY2 380 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 RAPGEFL1Q9UHV5 662 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 PF4P02776 101 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 SNX17Q15036 470 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 KREMEN1Q96MU8 473 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 PRR36Q9H6K5 1346 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 CHURC1-FNTBB4DL54 471 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 NUAK1O60285 661 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 F13A1P00488 732 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 CTSHP09668 335 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 LINC00310P59036 64 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 CHRNEQ04844 493 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 DUSP4Q13115 394 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 ASPNQ9BXN1 380 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 RBM47A0AV96 593 aaKnown RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 PEX10O60683 326 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 CLEC16AQ2KHT3 1053 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 TIGD5Q53EQ6 642 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 BAHD1Q8TBE0 780 aaPredicted RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 YBX2Q9Y2T7 364 aaKnown RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 F6X3S4 739 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
LINC01040-201ENST00000425048 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 TMEM132EQ6IEE7 984 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF605Q86T29 641 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 ANKS4BQ8N8V4 417 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 INTS4Q96HW7 963 aaKnown RBP8.94□□□□□ -0.98
LINC01040-201ENST00000425048 TMEM74Q96NL1 305 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 MCOLN1Q9GZU1 580 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 IRF2BPLQ9H1B7 796 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 KLHL3Q9UH77 587 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 DLG4P78352 724 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 TEKQ02763 1124 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 PWP1Q13610 501 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 PHACTR4Q8IZ21 702 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 KRTAP4-2Q9BYR5 136 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF552Q9H707 407 aaPredicted RBP8.93□□□□□ -0.98
LINC01040-201ENST00000425048 GPR160Q9UJ42 338 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 SEMA7AO75326 666 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 HTR3BO95264 441 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 GBP1P32455 592 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 PDE6BP35913 854 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 ENOX1Q8TC92 643 aaKnown RBP8.92□□□□□ -0.98
LINC01040-201ENST00000425048 RHOVQ96L33 236 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
LINC01040-201ENST00000425048 MYOCOSA0A1B0GUC4 107 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 SHISA3A0PJX4 238 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 INHBBP09529 407 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 LINC01599Q8WXQ3 324 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 KIF2CQ99661 725 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 EBF1Q9UH73 591 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 TEX51A0A1B0GUA7 166 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 B8ZZF3 427 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 PRRG2O14669 202 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 SORBS3O60504 671 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 MPP2Q14168 576 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 VWCEQ96DN2 955 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 CRELD1Q96HD1 420 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF281Q9Y2X9 895 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 PSPNO60542 156 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 MLECQ14165 292 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 SNAP47Q5SQN1 464 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 GOLM1Q8NBJ4 401 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 NCANO14594 1321 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RGS13O14921 159 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 FAM160A1Q05DH4 1040 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RNF111Q6ZNA4 994 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 USHBP1Q8N6Y0 703 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 CNOT6Q9ULM6 557 aaKnown RBP8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RPL10P27635 214 aaKnown RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 CTSWP56202 376 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 NMIQ13287 307 aaPredicted RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 REC114Q7Z4M0 266 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 OR14I1A6ND48 311 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DNAJA2O60884 412 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 ITGAEP38570 1179 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 ZNF385BQ569K4 471 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
LINC01040-201ENST00000425048 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DAGLBQ8NCG7 672 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms