RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 FAM221AA4D161 298 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 XPCQ01831 940 aaPredicted RBP8.99□□□□□ -0.97
LINC01040-201ENST00000425048 NR0B2Q15466 257 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 GATAD2BQ8WXI9 593 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 CWC22Q9HCG8 908 aaKnown RBP8.99□□□□□ -0.97
LINC01040-201ENST00000425048 TIMELESSQ9UNS1 1208 aa8.99□□□□□ -0.97
LINC01040-201ENST00000425048 TTLL10Q6ZVT0 673 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 IRF2BP1Q8IU81 584 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 CCDC74BQ96LY2 380 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 RAPGEFL1Q9UHV5 662 aa8.98□□□□□ -0.97
LINC01040-201ENST00000425048 PF4P02776 101 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 SNX17Q15036 470 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 RELL1Q8IUW5 271 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 KREMEN1Q96MU8 473 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 PRR36Q9H6K5 1346 aa8.97□□□□□ -0.97
LINC01040-201ENST00000425048 CHURC1-FNTBB4DL54 471 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 NUAK1O60285 661 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 F13A1P00488 732 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 CTSHP09668 335 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 LINC00310P59036 64 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 CHRNEQ04844 493 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 DUSP4Q13115 394 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 TMC4Q7Z404 712 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 ASPNQ9BXN1 380 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 REV1Q9UBZ9 1251 aa8.96□□□□□ -0.98
LINC01040-201ENST00000425048 RBM47A0AV96 593 aaKnown RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 PEX10O60683 326 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 CLEC16AQ2KHT3 1053 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 TIGD5Q53EQ6 642 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 SND1Q7KZF4 910 aaKnown RBP eCLIP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 BAHD1Q8TBE0 780 aaPredicted RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 RSRP1Q9BUV0 290 aa8.95□□□□□ -0.98
LINC01040-201ENST00000425048 YBX2Q9Y2T7 364 aaKnown RBP8.95□□□□□ -0.98
LINC01040-201ENST00000425048 F6X3S4 739 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 GBP2P32456 591 aaPredicted RBP8.94□□□□□ -0.98
LINC01040-201ENST00000425048 CHMP4BP1P59074 171 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 TMEM132EQ6IEE7 984 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF605Q86T29 641 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 ANKS4BQ8N8V4 417 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 INTS4Q96HW7 963 aaKnown RBP8.94□□□□□ -0.98
LINC01040-201ENST00000425048 TMEM74Q96NL1 305 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 MCOLN1Q9GZU1 580 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 IRF2BPLQ9H1B7 796 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 KLHL3Q9UH77 587 aa8.94□□□□□ -0.98
LINC01040-201ENST00000425048 DLG4P78352 724 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 TEKQ02763 1124 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 PWP1Q13610 501 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 PHACTR4Q8IZ21 702 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 KRTAP4-2Q9BYR5 136 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 ASCC2Q9H1I8 757 aaPredicted RBP8.93□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF552Q9H707 407 aaPredicted RBP8.93□□□□□ -0.98
LINC01040-201ENST00000425048 GPR160Q9UJ42 338 aa8.93□□□□□ -0.98
LINC01040-201ENST00000425048 SEMA7AO75326 666 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 HTR3BO95264 441 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 GBP1P32455 592 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 PDE6BP35913 854 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 ENOX1Q8TC92 643 aaKnown RBP8.92□□□□□ -0.98
LINC01040-201ENST00000425048 RHOVQ96L33 236 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 FAM161BQ96MY7 647 aa8.92□□□□□ -0.98
LINC01040-201ENST00000425048 POLR3KQ9Y2Y1 108 aaPredicted RBP8.92□□□□□ -0.98
LINC01040-201ENST00000425048 MYOCOSA0A1B0GUC4 107 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 SHISA3A0PJX4 238 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 GRIN3BO60391 1043 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 INHBBP09529 407 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 LINC01599Q8WXQ3 324 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 KIF2CQ99661 725 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 EBF1Q9UH73 591 aa8.91□□□□□ -0.98
LINC01040-201ENST00000425048 TEX51A0A1B0GUA7 166 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 B8ZZF3 427 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 PRRG2O14669 202 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 SORBS3O60504 671 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 MPP2Q14168 576 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 VWCEQ96DN2 955 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 CRELD1Q96HD1 420 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 ZNF281Q9Y2X9 895 aa8.9□□□□□ -0.98
LINC01040-201ENST00000425048 MINDY4BA8MYZ0 360 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 PSPNO60542 156 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 MLECQ14165 292 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 SNAP47Q5SQN1 464 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 GOLM1Q8NBJ4 401 aa8.89□□□□□ -0.99
LINC01040-201ENST00000425048 NCANO14594 1321 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RGS13O14921 159 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 FAM160A1Q05DH4 1040 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RNF111Q6ZNA4 994 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 USHBP1Q8N6Y0 703 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 SHISA4Q96DD7 197 aa8.88□□□□□ -0.99
LINC01040-201ENST00000425048 CNOT6Q9ULM6 557 aaKnown RBP8.88□□□□□ -0.99
LINC01040-201ENST00000425048 RPL10P27635 214 aaKnown RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 CTSWP56202 376 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 NMIQ13287 307 aaPredicted RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 REC114Q7Z4M0 266 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 SYTL5Q8TDW5 730 aaPredicted RBP8.87□□□□□ -0.99
LINC01040-201ENST00000425048 MRS2Q9HD23 443 aa8.87□□□□□ -0.99
LINC01040-201ENST00000425048 OR14I1A6ND48 311 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DNAJA2O60884 412 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 ITGAEP38570 1179 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 ZNF385BQ569K4 471 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DNAJC14Q6Y2X3 702 aaPredicted RBP8.86□□□□□ -0.99
LINC01040-201ENST00000425048 FBXO33Q7Z6M2 555 aa8.86□□□□□ -0.99
LINC01040-201ENST00000425048 DAGLBQ8NCG7 672 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms