RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 PTGDRQ13258 359 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 MCM6Q14566 821 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 KRT31Q15323 416 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 RASGRP2Q7LDG7 609 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 RHOXF2Q9BQY4 288 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 RNF26Q9BY78 433 aaPredicted RBP16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 TAB2Q9NYJ8 693 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 CEP131Q9UPN4 1083 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 CCDC196A0A1B0GTZ2 297 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 GYG1P46976 350 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 ARAP2Q8WZ64 1704 aa16.1■□□□□ 0.17
TPM3P9-201ENST00000424846 KIF4BQ2VIQ3 1234 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 ZNF384Q8TF68 577 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 TNFRSF25Q93038 417 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 CALCOCO1Q9P1Z2 691 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 CDC23Q9UJX2 597 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 ATP8B1O43520 1251 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 BEND6Q5SZJ8 279 aaPredicted RBP16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 PDE11AQ9HCR9 933 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 NHSL1Q5SYE7 1610 aa16.09■□□□□ 0.17
TPM3P9-201ENST00000424846 MAP2K7O14733 419 aa16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 KIF5CO60282 957 aa16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 ARHGAP25P42331 645 aa16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 AKAP17AQ02040 695 aaKnown RBP16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 NOA1Q8NC60 698 aaKnown RBP16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 CHP1Q99653 195 aa16.08■□□□□ 0.17
TPM3P9-201ENST00000424846 CHRNDQ07001 517 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 TROAPQ12815 778 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 E2F4Q16254 413 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 RRAGBQ5VZM2 374 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 ZSCAN10Q96SZ4 725 aaPredicted RBP16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 SLF1Q9BQI6 1058 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 ABCB6Q9NP58 842 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 ADAM21Q9UKJ8 722 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 GDAQ9Y2T3 454 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 COL1A1P02452 1464 aaPredicted RBP16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 CCDC151A5D8V7 595 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 GNAT2P19087 354 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 VSNL1P62760 191 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 SLC4A8Q2Y0W8 1093 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 TTC38Q5R3I4 469 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 TMTC2Q8N394 836 aa16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 SRBD1Q8N5C6 995 aaKnown RBP16.08■□□□□ 0.16
TPM3P9-201ENST00000424846 A0A0G2JS52 829 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 N4BP3O15049 544 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 NCAPH2Q6IBW4 605 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 ESR2Q92731 530 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 GSDMAQ96QA5 445 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 RIOK1Q9BRS2 568 aaKnown RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 BCL9O00512 1426 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 TRIM49BA6NDI0 452 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 MCM7P33993 719 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 FAM193AP78312 1265 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 IFIT1BQ5T764 474 aaKnown RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 PIK3AP1Q6ZUJ8 805 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 EEF2KMTQ96G04 330 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 ZFP91Q96JP5 570 aaPredicted RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 RNF41Q9H4P4 317 aaPredicted RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 ABHD10Q9NUJ1 306 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 RNF216Q9NWF9 866 aaPredicted RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 BTG4Q9NY30 223 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 REXO2Q9Y3B8 237 aaKnown RBP16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 TAF1P21675 1872 aa16.07■□□□□ 0.16
TPM3P9-201ENST00000424846 CICQ96RK0 1608 aaPredicted RBP16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 MAGEB6P1A0A0J9YX57 407 aa16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 PRPF3O43395 683 aaKnown RBP16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 PDXDC2PQ6P474 469 aa16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 BCL9LQ86UU0 1499 aa16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 RAD51AP2Q09MP3 1159 aa16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 FAM47AQ5JRC9 791 aa16.06■□□□□ 0.16
TPM3P9-201ENST00000424846 XIRP1Q702N8 1843 aaKnown RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 TULP2O00295 520 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 LMAN1P49257 510 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 ATP2C1P98194 919 aaPredicted RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 C3orf67Q6ZVT6 689 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 CTAGE9A4FU28 777 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 ERVV-1B6SEH8 477 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 PMS1P54277 932 aaKnown RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 MAPK8IP2Q13387 824 aaPredicted RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 NUP88Q99567 741 aaPredicted RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 NAA15Q9BXJ9 866 aaKnown RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 HDAC6Q9UBN7 1215 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 LCMT1Q9UIC8 334 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 PLCH1Q4KWH8 1693 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 CNTNAP5Q8WYK1 1306 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 ENC1O14682 589 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 FECHP22830 423 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 IL6STP40189 918 aaPredicted RBP16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 BRD3Q15059 726 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 FILIP1LQ4L180 1135 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 MSANTD4Q8NCY6 345 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 RASGRP4Q8TDF6 673 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 NELFBQ8WX92 580 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 FERMT2Q96AC1 680 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 RAB21Q9UL25 225 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 L1RE1Q9UN81 338 aa16.05■□□□□ 0.16
TPM3P9-201ENST00000424846 RTL9Q8NET4 1388 aa16.04■□□□□ 0.16
TPM3P9-201ENST00000424846 PP2D1A8MPX8 630 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms