RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 STX6O43752 255 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 TPM1P09493 284 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 ADD2P35612 726 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 MAGEA9P43362 315 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 DEUP1Q05D60 604 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 PACS1Q6VY07 963 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 SLF2Q8IX21 1173 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 SPATA5Q8NB90 893 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 BRF1Q92994 677 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 FAM81BQ96LP2 452 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 SLC7A5P2Q9GIP4 190 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 TMEM165Q9HC07 324 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 ODF2LQ9ULJ1 636 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 NSFL1CQ9UNZ2 370 aaKnown RBP9.69□□□□□ -0.86
VPS8-204ENST00000424463 ZNF532Q9HCE3 1301 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 MYH3P11055 1940 aa9.69□□□□□ -0.86
VPS8-204ENST00000424463 GPAA1O43292 621 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 MTA2O94776 668 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 UQCRFS1P1P0C7P4 283 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 ZSCAN22P10073 491 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 IL4RP24394 825 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 ATICP31939 592 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 PRPHP41219 470 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 CLK1P49759 484 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 ANKRD1Q15327 319 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 LRRFIP1Q32MZ4 808 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 CCDC92Q53HC0 331 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 FAM196AQ6ZSG2 479 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 TEX11Q8IYF3 940 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 PDILTQ8N807 584 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 HDAC7Q8WUI4 952 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 CELF1Q92879 486 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS8-204ENST00000424463 RBSNQ9H1K0 784 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 TRMT1Q9NXH9 659 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 TRPC5Q9UL62 973 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.68□□□□□ -0.86
VPS8-204ENST00000424463 ABCC12Q96J65 1359 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 COL5A3P25940 1745 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 CTIFO43310 598 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 PDE6AP16499 860 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 EXOSC10Q01780 885 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 TTF1Q15361 905 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 SF3B3Q15393 1217 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 LONRF1Q17RB8 773 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 KLHL40Q2TBA0 621 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 DHX32Q7L7V1 743 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 UBE2Q1Q7Z7E8 422 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 ANKRD18AQ8IVF6 992 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 MIGA1Q8NAN2 632 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 SLC43A3Q8NBI5 491 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 SYAP1Q96A49 352 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 CDC5LQ99459 802 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
VPS8-204ENST00000424463 GPHNQ9NQX3 736 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 SPATS2LQ9NUQ6 558 aaKnown RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 PPP1R1BQ9UD71 204 aaPredicted RBP9.68□□□□□ -0.86
VPS8-204ENST00000424463 TCRBV5S4A2TA0A5A2 114 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 TRIM37O94972 964 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 PECAM1P16284 738 aaPredicted RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 GYG1P46976 350 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 CCNHP51946 323 aaPredicted RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 APOBRQ0VD83 1088 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 SLC10A5Q5PT55 438 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 CAVIN1Q6NZI2 390 aaKnown RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 CC2D1AQ6P1N0 951 aaPredicted RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 BAG1Q99933 345 aaPredicted RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 ATP8A1Q9Y2Q0 1164 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 THSD7AQ9UPZ6 1657 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 RTL9Q8NET4 1388 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 DDX60Q8IY21 1712 aaKnown RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 BTAF1O14981 1849 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 EME2A4GXA9 379 aaPredicted RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 TMEM110-MUSTN1A8MSY1 372 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 JAK2O60674 1132 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 PPFIA3O75145 1194 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 CPP00450 1065 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 HARSP12081 509 aaKnown RBP9.67□□□□□ -0.86
VPS8-204ENST00000424463 RFC4P35249 363 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 TMED1Q13445 227 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 MTHFD1LQ6UB35 978 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 SLC51AQ86UW1 340 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 LMNTD2Q8IXW0 634 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 MAGEB6Q8N7X4 407 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 WDR70Q9NW82 654 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 MINPP1Q9UNW1 487 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 MTMR6Q9Y217 621 aa9.67□□□□□ -0.86
VPS8-204ENST00000424463 VPS37CA5D8V6 355 aaPredicted RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 GADD45BO75293 160 aaPredicted RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 MAGEA10P43363 369 aaPredicted RBP9.66□□□□□ -0.86
VPS8-204ENST00000424463 SYCP1Q15431 976 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 TRAPPC3LQ5T215 181 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 ZSCAN25Q6NSZ9 544 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 USP48Q86UV5 1035 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 RNF214Q8ND24 703 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 NKX2-3Q8TAU0 364 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 COMMD8Q9NX08 183 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 ANKIB1Q9P2G1 1089 aa9.66□□□□□ -0.86
VPS8-204ENST00000424463 DENND2AQ9ULE3 1009 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms