RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 ZNF219Q9P2Y4 722 aaPredicted RBP19■□□□□ 0.63
CMTM3-202ENST00000424011 CEP131Q9UPN4 1083 aa19■□□□□ 0.63
CMTM3-202ENST00000424011 CNTNAP5Q8WYK1 1306 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 DPEP1P16444 411 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 PTPAQ15257 358 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 CERS5Q8N5B7 392 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 SRBD1Q8N5C6 995 aaKnown RBP18.99■□□□□ 0.63
CMTM3-202ENST00000424011 TTLL6Q8N841 843 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 TEKT1Q969V4 418 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 PHF20Q9BVI0 1012 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 KRT2P35908 639 aa18.99■□□□□ 0.63
CMTM3-202ENST00000424011 AXDND1Q5T1B0 1012 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-202ENST00000424011 C11orf57Q6ZUT1 292 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-202ENST00000424011 TTC12Q9H892 705 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-202ENST00000424011 F8W031 263 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-202ENST00000424011 NEDD1Q8NHV4 660 aa18.98■□□□□ 0.63
CMTM3-202ENST00000424011 ERCC4Q92889 916 aaPredicted RBP18.98■□□□□ 0.63
CMTM3-202ENST00000424011 MRIQ9BWK5 157 aa18.98■□□□□ 0.63
CMTM3-202ENST00000424011 GOLGB1Q14789 3259 aaKnown RBP18.98■□□□□ 0.63
CMTM3-202ENST00000424011 A0A087WWV3 80 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 CUTAO60888 179 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 STRIP1Q5VSL9 837 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 SLC44A5Q8NCS7 719 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 SUPT20HQ8NEM7 779 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 LZTS2Q9BRK4 669 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 SDF4Q9BRK5 362 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 VPS54Q9P1Q0 977 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 SNED1Q8TER0 1413 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 USP17L3A6NCW0 530 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 USP17L4A6NCW7 530 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 WDHD1O75717 1129 aaPredicted RBP18.97■□□□□ 0.63
CMTM3-202ENST00000424011 SCG2P13521 617 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 MARCKSP29966 332 aaPredicted RBP18.97■□□□□ 0.63
CMTM3-202ENST00000424011 TGFB2P61812 414 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 GRM4Q14833 912 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 STX1AQ16623 288 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 DNTTIP2Q5QJE6 756 aaKnown RBP18.97■□□□□ 0.63
CMTM3-202ENST00000424011 USP17L1Q7RTZ2 530 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 STX8Q9UNK0 236 aa18.97■□□□□ 0.63
CMTM3-202ENST00000424011 DDX60LQ5H9U9 1706 aaKnown RBP18.97■□□□□ 0.63
CMTM3-202ENST00000424011 C21orf2O43822 256 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 PFKFB3Q16875 520 aaPredicted RBP18.96■□□□□ 0.63
CMTM3-202ENST00000424011 SPC24Q8NBT2 197 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 USP40Q9NVE5 1235 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 NR5A1Q13285 461 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 IQCB1Q15051 598 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 KRI1Q8N9T8 703 aaKnown RBP18.96■□□□□ 0.63
CMTM3-202ENST00000424011 DBNDD1Q9H9R9 158 aa18.96■□□□□ 0.63
CMTM3-202ENST00000424011 HDLBPQ00341 1268 aaKnown RBP18.95■□□□□ 0.62
CMTM3-202ENST00000424011 TSC1Q92574 1164 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 SH3GLB2Q9NR46 395 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 SWAP70Q9UH65 585 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 MORC2Q9Y6X9 1032 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-202ENST00000424011 ZNF202O95125 648 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 PFKFB1P16118 471 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 TOB1P50616 345 aaPredicted RBP18.95■□□□□ 0.62
CMTM3-202ENST00000424011 PICALMQ13492 652 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 TMEM47Q9BQJ4 181 aa18.95■□□□□ 0.62
CMTM3-202ENST00000424011 KIF13BQ9NQT8 1826 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 FAM237AA0A1B0GTK4 181 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 ECE2O60344 883 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 BMP15O95972 392 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 CALML3P27482 149 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 FAM177A1Q8N128 213 aaPredicted RBP18.94■□□□□ 0.62
CMTM3-202ENST00000424011 ZDHHC15Q96MV8 337 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 SGIP1Q9BQI5 828 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 CABP5Q9NP86 173 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 hCG_1642624A0A1W2PR95 340 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 SCNN1DP51172 638 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 RESP18Q5W5W9 173 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 OXER1Q8TDS5 423 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 ANO10Q9NW15 660 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 MAD2L2Q9UI95 211 aa18.94■□□□□ 0.62
CMTM3-202ENST00000424011 MYO3BQ8WXR4 1341 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 HLA-DOAP06340 250 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 TOP1P11387 765 aaKnown RBP18.93■□□□□ 0.62
CMTM3-202ENST00000424011 SYKP43405 635 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 CRKP46108 304 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 NLRP5P59047 1200 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 ZRSR1Q15695 479 aaKnown RBP18.93■□□□□ 0.62
CMTM3-202ENST00000424011 PLA2G4DQ86XP0 818 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 MXD3Q9BW11 206 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 HPSEQ9Y251 543 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 PLIN4Q96Q06 1357 aa18.93■□□□□ 0.62
CMTM3-202ENST00000424011 ZNF75DP51815 510 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 GABPAQ06546 454 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 CCDC93Q567U6 631 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 APOBEC3HQ6NTF7 200 aaKnown RBP18.92■□□□□ 0.62
CMTM3-202ENST00000424011 CDC42EP5Q6NZY7 148 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 RTKN2Q8IZC4 609 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 CDK5RAP2Q96SN8 1893 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 TRIM5Q9C035 493 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 PSDA5PKW4 1024 aaPredicted RBP18.92■□□□□ 0.62
CMTM3-202ENST00000424011 TRIM75PA6NK02 468 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 NOVP48745 357 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 DACT2Q5SW24 774 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 SHC4Q6S5L8 630 aa18.92■□□□□ 0.62
CMTM3-202ENST00000424011 ZNF579Q8NAF0 562 aaKnown RBP18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms