RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 HSPA4P34932 840 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 SH3D19Q5HYK7 790 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 GPAT2Q6NUI2 795 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 USP17L2Q6R6M4 530 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 CYB5R4Q7L1T6 521 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 IFNL1Q8IU54 200 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 FAM43AQ8N2R8 423 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 NCOA7Q8NI08 942 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 ZKSCAN3Q9BRR0 538 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 KIAA1683Q9H0B3 1180 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 TCP11L1Q9NUJ3 509 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 TMOD4Q9NZQ9 345 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 NYAP2Q9P242 653 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 LAMB1P07942 1786 aa10.94□□□□□ -0.66
PDGFC-202ENST00000422544 EPB41L2O43491 1005 aaKnown RBP10.93□□□□□ -0.66
PDGFC-202ENST00000422544 TTLL1O95922 423 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 ZKSCAN1P17029 563 aaPredicted RBP10.93□□□□□ -0.66
PDGFC-202ENST00000422544 USP14P54578 494 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 COL9A3Q14050 684 aaPredicted RBP10.93□□□□□ -0.66
PDGFC-202ENST00000422544 KIAA1755Q5JYT7 1200 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 TREML2Q5T2D2 321 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 PRPF38BQ5VTL8 546 aaKnown RBP10.93□□□□□ -0.66
PDGFC-202ENST00000422544 CHST3Q7LGC8 479 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 RALYLQ86SE5 291 aaKnown RBP10.93□□□□□ -0.66
PDGFC-202ENST00000422544 KCNB2Q92953 911 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 MKL1Q969V6 931 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 BEGAINQ9BUH8 593 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 RNF186Q9NXI6 227 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 STX8Q9UNK0 236 aa10.93□□□□□ -0.66
PDGFC-202ENST00000422544 PLIN4Q96Q06 1357 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 PDHXO00330 501 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 RAD21O60216 631 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 EIF5BO60841 1220 aaKnown RBP10.92□□□□□ -0.66
PDGFC-202ENST00000422544 TRPA1O75762 1119 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 NOVP48745 357 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 NT5C2P49902 561 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 ADCK5Q3MIX3 580 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 TSGA10IPQ3SY00 556 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 OTUD7BQ6GQQ9 843 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 ANKRD23Q86SG2 305 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 IQCA1Q86XH1 822 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 MB21D2Q8IYB1 491 aaPredicted RBP10.92□□□□□ -0.66
PDGFC-202ENST00000422544 SPICE1Q8N0Z3 855 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 LRRC47Q8N1G4 583 aaKnown RBP10.92□□□□□ -0.66
PDGFC-202ENST00000422544 PROCA1Q8NCQ7 364 aaPredicted RBP10.92□□□□□ -0.66
PDGFC-202ENST00000422544 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
PDGFC-202ENST00000422544 SH2D4AQ9H788 454 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 VCPKMTQ9H867 229 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 AGTPBP1Q9UPW5 1226 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 SNX14Q9Y5W7 946 aa10.92□□□□□ -0.66
PDGFC-202ENST00000422544 DOCK1Q14185 1865 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 LAMA3Q16787 3333 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 F5H6K3 240 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 TBC1D8O95759 1140 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 TOP1P11387 765 aaKnown RBP10.91□□□□□ -0.66
PDGFC-202ENST00000422544 VCAM1P19320 739 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 MCCP23508 829 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 ANTXR2P58335 489 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 KLRC3Q07444 240 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 KRT32Q14532 448 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 CCDC178Q5BJE1 867 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 PPP4R3BQ5MIZ7 849 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 RCSD1Q6JBY9 416 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 CHMP4CQ96CF2 233 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 C12orf42Q96LP6 360 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 TTC14Q96N46 770 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 NEK1Q96PY6 1258 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 TMEM47Q9BQJ4 181 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 UBAC1Q9BSL1 405 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 GOPCQ9HD26 462 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 MTMR7Q9Y216 660 aa10.91□□□□□ -0.66
PDGFC-202ENST00000422544 TNKSO95271 1327 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 CUL9Q8IWT3 2517 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 IFIT3O14879 490 aaKnown RBP10.9□□□□□ -0.66
PDGFC-202ENST00000422544 PRC1O43663 620 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 NDUFB10O96000 172 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 ALDH1A1P00352 501 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 CYP2C8P10632 490 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 MCM5P33992 734 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 SLFN13Q68D06 897 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 DGKHQ86XP1 1220 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 ENAHQ8N8S7 591 aaPredicted RBP10.9□□□□□ -0.66
PDGFC-202ENST00000422544 ANKS1AQ92625 1134 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 LPAR1Q92633 364 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 JAKMIP1Q96N16 626 aaKnown RBP10.9□□□□□ -0.66
PDGFC-202ENST00000422544 NUP88Q99567 741 aaPredicted RBP10.9□□□□□ -0.66
PDGFC-202ENST00000422544 R3HDMLQ9H3Y0 253 aa10.9□□□□□ -0.66
PDGFC-202ENST00000422544 RPAP3Q9H6T3 665 aaPredicted RBP10.9□□□□□ -0.66
PDGFC-202ENST00000422544 ERICH2A1L162 156 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L15C9J2P7 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L13C9JLJ4 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L11C9JVI0 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L18D6R9N7 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L22D6RA61 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L17D6RBQ6 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L19D6RCP7 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 USP17L20D6RJB6 530 aa10.89□□□□□ -0.67
PDGFC-202ENST00000422544 CPA1P15085 419 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms