RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 SCAF11Q99590 1463 aaKnown RBP7.84□□□□□ -1.15
SFXN1-202ENST00000421887 PPM1JQ5JR12 505 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 CDKAL1Q5VV42 579 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 DTHD1Q6ZMT9 781 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 TXNDC2Q86VQ3 553 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 NPAS4Q8IUM7 802 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 CCDC97Q96F63 343 aaPredicted RBP7.84□□□□□ -1.15
SFXN1-202ENST00000421887 FOXQ1Q9C009 403 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 PRDM5Q9NQX1 630 aaPredicted RBP7.84□□□□□ -1.15
SFXN1-202ENST00000421887 TRAK1Q9UPV9 953 aa7.84□□□□□ -1.15
SFXN1-202ENST00000421887 CCNB3Q8WWL7 1395 aa7.84□□□□□ -1.16
SFXN1-202ENST00000421887 FAM155AB1AL88 458 aaPredicted RBP7.83□□□□□ -1.16
SFXN1-202ENST00000421887 SULF2Q8IWU5 870 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 STK35Q8TDR2 534 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 CCDC74AQ96AQ1 378 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 IRF2BPLQ9H1B7 796 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 UBR1Q8IWV7 1749 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 MSH6P52701 1360 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 TMEM94Q12767 1356 aa7.83□□□□□ -1.16
SFXN1-202ENST00000421887 RTEL1-TNFRSF6BF6WH68 1400 aa7.82□□□□□ -1.16
SFXN1-202ENST00000421887 EOMESO95936 686 aa7.82□□□□□ -1.16
SFXN1-202ENST00000421887 LINC00310P59036 64 aa7.82□□□□□ -1.16
SFXN1-202ENST00000421887 UBE3DQ7Z6J8 389 aa7.82□□□□□ -1.16
SFXN1-202ENST00000421887 GPBAR1Q8TDU6 330 aa7.82□□□□□ -1.16
SFXN1-202ENST00000421887 CDK12Q9NYV4 1490 aaPredicted RBP7.81□□□□□ -1.16
SFXN1-202ENST00000421887 CASKIN1Q8WXD9 1431 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 MED14OSP0DP75 135 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 GLDCP23378 1020 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 FCGRTP55899 365 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 GRM2Q14416 872 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 CDC37L1Q7L3B6 337 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 ABHD4Q8TB40 342 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 CBX8Q9HC52 389 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 SEMA3GQ9NS98 782 aa7.81□□□□□ -1.16
SFXN1-202ENST00000421887 H3BS24 57 aa7.8□□□□□ -1.16
SFXN1-202ENST00000421887 RAC2P15153 192 aa7.8□□□□□ -1.16
SFXN1-202ENST00000421887 ARNTP27540 789 aa7.8□□□□□ -1.16
SFXN1-202ENST00000421887 CCDC120Q96HB5 630 aa7.8□□□□□ -1.16
SFXN1-202ENST00000421887 MAPK8IP1Q9UQF2 711 aa7.8□□□□□ -1.16
SFXN1-202ENST00000421887 FGD6Q6ZV73 1430 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 TMEM88BA6NKF7 163 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 DCDC2CA8MYV0 355 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 PRR33A8MZF0 331 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 KCNA6P17658 529 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 LTKP29376 864 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 C12orf40Q86WS4 652 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 ALPK1Q96QP1 1244 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 SLAMF8Q9P0V8 285 aa7.79□□□□□ -1.16
SFXN1-202ENST00000421887 TPX2Q9ULW0 747 aaKnown RBP7.79□□□□□ -1.16
SFXN1-202ENST00000421887 LRP6O75581 1613 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 COL16A1Q07092 1604 aaPredicted RBP7.78□□□□□ -1.16
SFXN1-202ENST00000421887 EIF1AYO14602 144 aaKnown RBP7.78□□□□□ -1.16
SFXN1-202ENST00000421887 BMP7P18075 431 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 MPRIPQ6WCQ1 1025 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 C14orf37Q86TY3 774 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 TTC6Q86TZ1 520 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 SLC26A8Q96RN1 970 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 ZCCHC4Q9H5U6 513 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 PARD6AQ9NPB6 346 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 SHPRHQ149N8 1683 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 SLIT1O75093 1534 aa7.78□□□□□ -1.16
SFXN1-202ENST00000421887 ERVK-7P63135 1459 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 FYCO1Q9BQS8 1478 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 NDUFB5O43674 189 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 NTF4P34130 210 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 PDE3BQ13370 1112 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 MFSD4AQ8N468 514 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 EPS8L3Q8TE67 593 aaKnown RBP7.77□□□□□ -1.17
SFXN1-202ENST00000421887 EMILIN2Q9BXX0 1053 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 PPP4R2Q9NY27 417 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 GTF3C3Q9Y5Q9 886 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 PRDM15P57071 1507 aaPredicted RBP7.77□□□□□ -1.17
SFXN1-202ENST00000421887 MAP3K1Q13233 1512 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 AFF2P51816 1311 aa7.77□□□□□ -1.17
SFXN1-202ENST00000421887 ZNF644Q9H582 1327 aaPredicted RBP7.77□□□□□ -1.17
SFXN1-202ENST00000421887 TIAM1Q13009 1591 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 NKTRP30414 1462 aaKnown RBP7.76□□□□□ -1.17
SFXN1-202ENST00000421887 ARHGAP23Q9P227 1491 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 MTUS2Q5JR59 1369 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 RBM6P78332 1123 aaKnown RBP7.76□□□□□ -1.17
SFXN1-202ENST00000421887 FGD1P98174 961 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 PHLDB3Q6NSJ2 640 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 ERICH6Q7L0X2 663 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 ARMCX6Q7L4S7 300 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 SERPINA10Q9UK55 444 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 AKAP2Q9Y2D5 859 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 ABCC3O15438 1527 aa7.76□□□□□ -1.17
SFXN1-202ENST00000421887 CCDC141Q6ZP82 1450 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 CEP152O94986 1710 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 FOXD2O60548 495 aaPredicted RBP7.75□□□□□ -1.17
SFXN1-202ENST00000421887 TSPY4P0CV99 314 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 TSPY10P0CW01 314 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 NME2P22392 152 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 ERVFC1P60507 584 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 SFRP5Q5T4F7 317 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 KRTAP5-3Q6L8H2 238 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 TMC1Q8TDI8 760 aa7.75□□□□□ -1.17
SFXN1-202ENST00000421887 MYLIPQ8WY64 445 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms