RNA–Protein interactions for RNA: ENST00000420833.5

TMEM106B-203, Transcript of transmembrane protein 106B, humanhuman

TSL 1 (best)

Gene TMEM106B, Length 1,492 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106B-203ENST00000420833 IGDCC4Q8TDY8 1250 aa18.15■□□□□ 0.5
TMEM106B-203ENST00000420833 GTF2A2P52657 109 aa18.14■□□□□ 0.5
TMEM106B-203ENST00000420833 SEC23AQ15436 765 aa18.14■□□□□ 0.5
TMEM106B-203ENST00000420833 KAT14Q9H8E8 782 aa18.14■□□□□ 0.5
TMEM106B-203ENST00000420833 GOPCQ9HD26 462 aa18.14■□□□□ 0.5
TMEM106B-203ENST00000420833 OTOFQ9HC10 1997 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 A0A1W2PRG0 241 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 FAM155AB1AL88 458 aaPredicted RBP18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 GJA5P36382 358 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 LIFRP42702 1097 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 NOGQ13253 232 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 MTMR2Q13614 643 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 SH3D19Q5HYK7 790 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 RCSD1Q6JBY9 416 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 CYP4F22Q6NT55 531 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 USP17L2Q6R6M4 530 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 FBXL16Q8N461 479 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 TMEM47Q9BQJ4 181 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 UPF3BQ9BZI7 483 aaKnown RBP18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 TMOD4Q9NZQ9 345 aa18.14■□□□□ 0.49
TMEM106B-203ENST00000420833 A0A0G2JLL6 359 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 MANSC4A6NHS7 340 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 SH2B2O14492 632 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 CETPP11597 493 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 CPA1P15085 419 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 INHBEP58166 350 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 MKRN3Q13064 507 aaKnown RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 COL9A3Q14050 684 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 FASTKD5Q7L8L6 764 aaKnown RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 PRRT2Q7Z6L0 340 aaPredicted RBP18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 TNS4Q8IZW8 715 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 CAPNS2Q96L46 248 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 PDRG1Q9NUG6 133 aa18.13■□□□□ 0.49
TMEM106B-203ENST00000420833 GREB1LQ9C091 1923 aaPredicted RBP18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 NEK4P51957 841 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 GRM1Q13255 1194 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 RABEP1Q15276 862 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 Q6ZUG5 572 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 LRRC47Q8N1G4 583 aaKnown RBP18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 GMCL1P1Q8NEA9 526 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 LPAR1Q92633 364 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 TCEANC2Q96MN5 208 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 KIF2CQ99661 725 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 LRRC2Q9BYS8 371 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 VCPKMTQ9H867 229 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 LY9Q9HBG7 655 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 ATAD5Q96QE3 1844 aa18.12■□□□□ 0.49
TMEM106B-203ENST00000420833 CCDC69A6NI79 296 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 F5H6K3 240 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 HMGCS2P54868 508 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 KLRC3Q07444 240 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 ANKRD1Q15327 319 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 ZYXQ15942 572 aaKnown RBP18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 NFXL1Q6ZNB6 911 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 SGMS1Q86VZ5 419 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 REM2Q8IYK8 340 aaPredicted RBP18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 PROCA1Q8NCQ7 364 aaPredicted RBP18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 PNMA1Q8ND90 353 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 MS4A4AQ96JQ5 239 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 C12orf42Q96LP6 360 aa18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 ALDH8A1Q9H2A2 487 aaPredicted RBP18.11■□□□□ 0.49
TMEM106B-203ENST00000420833 RAD21O60216 631 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 SREBF2Q12772 1141 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 SYNE3Q6ZMZ3 975 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 CATIPQ7Z7H3 387 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 AGXT2Q9BYV1 514 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 EMILIN3Q9NT22 766 aa18.1■□□□□ 0.49
TMEM106B-203ENST00000420833 CCL15-CCL14A0A0B4J2E2 113 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 TESPA1A2RU30 521 aaPredicted RBP18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 CCL15Q16663 113 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 SLFN13Q68D06 897 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 GADL1Q6ZQY3 521 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 SLC12A7Q9Y666 1083 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 WDR33Q9C0J8 1336 aaKnown RBP18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 PCNTO95613 3336 aa18.09■□□□□ 0.49
TMEM106B-203ENST00000420833 MAP2K2P36507 400 aa18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 VEGFBP49765 207 aa18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 KIF23Q02241 960 aaPredicted RBP18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 BRF1Q92994 677 aa18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 GMCL1Q96IK5 515 aa18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 GPHNQ9NQX3 736 aaPredicted RBP18.08■□□□□ 0.49
TMEM106B-203ENST00000420833 WDR46O15213 610 aaKnown RBP18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 ST18O60284 1047 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 NDUFB10O96000 172 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 CALM1P0DP23 149 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 CALM2P0DP24 149 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 CALM3P0DP25 149 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 SLC1A4P43007 532 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 PABPC4Q13310 644 aaKnown RBP eCLIP18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 OTUD7BQ6GQQ9 843 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 SPICE1Q8N0Z3 855 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 DCAF4Q8WV16 495 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 SENP2Q9HC62 589 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 DDAH1O94760 285 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 VCAM1P19320 739 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 TM4SF4P48230 202 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 ZNF654Q8IZM8 581 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 BRI3BPQ8WY22 251 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 MAP3K14Q99558 947 aa18.07■□□□□ 0.48
TMEM106B-203ENST00000420833 AGTPBP1Q9UPW5 1226 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms