RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 CHRDL2Q6WN34 429 aa25.58■■□□□ 1.69
PTPN4-202ENST00000420482 APPBP2Q92624 585 aa25.58■■□□□ 1.69
PTPN4-202ENST00000420482 BAZ2AQ9UIF9 1905 aaKnown RBP25.57■■□□□ 1.68
PTPN4-202ENST00000420482 A0A1W2PRG0 241 aa25.57■■□□□ 1.68
PTPN4-202ENST00000420482 SPDYE16A6NNV3 312 aaPredicted RBP25.57■■□□□ 1.68
PTPN4-202ENST00000420482 RNF113AO15541 343 aaKnown RBP25.57■■□□□ 1.68
PTPN4-202ENST00000420482 AKR1B1P15121 316 aa25.57■■□□□ 1.68
PTPN4-202ENST00000420482 GNAT2P19087 354 aa25.57■■□□□ 1.68
PTPN4-202ENST00000420482 MORN1Q5T089 497 aa25.57■■□□□ 1.68
PTPN4-202ENST00000420482 CTR9Q6PD62 1173 aa25.57■■□□□ 1.68
PTPN4-202ENST00000420482 STRBPQ96SI9 672 aaKnown RBP25.57■■□□□ 1.68
PTPN4-202ENST00000420482 PRKAR2AP13861 404 aaKnown RBP25.56■■□□□ 1.68
PTPN4-202ENST00000420482 NECAB2Q7Z6G3 386 aa25.56■■□□□ 1.68
PTPN4-202ENST00000420482 MB21D1Q8N884 522 aa25.56■■□□□ 1.68
PTPN4-202ENST00000420482 KANSL2Q9H9L4 492 aa25.56■■□□□ 1.68
PTPN4-202ENST00000420482 TMX2Q9Y320 296 aa25.56■■□□□ 1.68
PTPN4-202ENST00000420482 CYP2D7A0A087X1C5 515 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 SLC15A5A6NIM6 579 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 CNMDO75829 334 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 CHGBP05060 677 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 MAP2K5Q13163 448 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 USP6NLQ92738 828 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 VCPKMTQ9H867 229 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 ZNF287Q9HBT7 754 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 PCDHB15Q9Y5E8 787 aa25.55■■□□□ 1.68
PTPN4-202ENST00000420482 RANBP2P49792 3224 aaKnown RBP25.55■■□□□ 1.68
PTPN4-202ENST00000420482 SBK1Q52WX2 424 aa25.54■■□□□ 1.68
PTPN4-202ENST00000420482 MAP3K21Q5TCX8 1036 aa25.54■■□□□ 1.68
PTPN4-202ENST00000420482 TSHZ3Q63HK5 1081 aa25.54■■□□□ 1.68
PTPN4-202ENST00000420482 WDR46O15213 610 aaKnown RBP25.53■■□□□ 1.68
PTPN4-202ENST00000420482 PTPREP23469 700 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 ATP2B2Q01814 1243 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 TRIM32Q13049 653 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 POTEEQ6S8J3 1075 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 MKNK2Q9HBH9 465 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 GOPCQ9HD26 462 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 BTBD7Q9P203 1132 aa25.53■■□□□ 1.68
PTPN4-202ENST00000420482 RBM27Q9P2N5 1060 aaKnown RBP25.53■■□□□ 1.68
PTPN4-202ENST00000420482 STRNO43815 780 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 EVI5O60447 810 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 FLOT1O75955 427 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 APPP05067 770 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 TDO2P48775 406 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 MFSD14CQ5VZR4 134 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 OSBP2Q969R2 916 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 PAWRQ96IZ0 340 aaKnown RBP25.52■■□□□ 1.68
PTPN4-202ENST00000420482 PRO3102Q9H379 93 aa25.52■■□□□ 1.68
PTPN4-202ENST00000420482 GSG1L2A8MUP6 293 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 MINDY4BA8MYZ0 360 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 GPAA1O43292 621 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 MX1P20591 662 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 SPICE1Q8N0Z3 855 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 SHCBP1Q8NEM2 672 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 FSD1Q9BTV5 496 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 NACAP1Q9BZK3 213 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 NBPF3Q9H094 633 aa25.51■■□□□ 1.67
PTPN4-202ENST00000420482 EEF2P13639 858 aaKnown RBP25.5■■□□□ 1.67
PTPN4-202ENST00000420482 DSG3P32926 999 aa25.5■■□□□ 1.67
PTPN4-202ENST00000420482 CACNB2Q08289 660 aaPredicted RBP25.5■■□□□ 1.67
PTPN4-202ENST00000420482 SPATC1LQ9H0A9 340 aa25.5■■□□□ 1.67
PTPN4-202ENST00000420482 SLC5A4Q9NY91 659 aa25.5■■□□□ 1.67
PTPN4-202ENST00000420482 SZT2Q5T011 3432 aa25.5■■□□□ 1.67
PTPN4-202ENST00000420482 RAD21O60216 631 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 AAMPQ13685 434 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 GRB14Q14449 540 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 PLS1Q14651 629 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 DPP9Q86TI2 863 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 CLEC10AQ8IUN9 316 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 SIAH1Q8IUQ4 282 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 MOV10L1Q9BXT6 1211 aaKnown RBP25.49■■□□□ 1.67
PTPN4-202ENST00000420482 MROH8Q9H579 483 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 OGDHLQ9ULD0 1010 aa25.49■■□□□ 1.67
PTPN4-202ENST00000420482 PATL2C9JE40 543 aaKnown RBP25.48■■□□□ 1.67
PTPN4-202ENST00000420482 HOXC6P09630 235 aa25.48■■□□□ 1.67
PTPN4-202ENST00000420482 CCL14Q16627 93 aa25.48■■□□□ 1.67
PTPN4-202ENST00000420482 ROBO3Q96MS0 1386 aa25.47■■□□□ 1.67
PTPN4-202ENST00000420482 SLC3A2P08195 630 aaKnown RBP25.47■■□□□ 1.67
PTPN4-202ENST00000420482 SAMD1Q6SPF0 538 aaPredicted RBP25.47■■□□□ 1.67
PTPN4-202ENST00000420482 ZNF444Q8N0Y2 327 aaPredicted RBP25.47■■□□□ 1.67
PTPN4-202ENST00000420482 PI4K2BQ8TCG2 481 aa25.47■■□□□ 1.67
PTPN4-202ENST00000420482 CRBNQ96SW2 442 aa25.47■■□□□ 1.67
PTPN4-202ENST00000420482 SMIM22K7EJ46 135 aa25.46■■□□□ 1.67
PTPN4-202ENST00000420482 MSCO60682 206 aa25.46■■□□□ 1.67
PTPN4-202ENST00000420482 KIAA1755Q5JYT7 1200 aa25.46■■□□□ 1.67
PTPN4-202ENST00000420482 ANKRD45Q5TZF3 282 aa25.46■■□□□ 1.67
PTPN4-202ENST00000420482 C11orf49Q9H6J7 331 aa25.46■■□□□ 1.67
PTPN4-202ENST00000420482 M0R2C6 588 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 SLC25A27O95847 323 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 ERCC3P19447 782 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 RASA1P20936 1047 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 NCAPG2Q86XI2 1143 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 ABRAQ8N0Z2 381 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 DIS3LQ8TF46 1054 aaKnown RBP25.45■■□□□ 1.66
PTPN4-202ENST00000420482 ATG4CQ96DT6 458 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 YTHDC1Q96MU7 727 aaKnown RBP25.45■■□□□ 1.66
PTPN4-202ENST00000420482 A0A0G2JMZ2 1700 aa25.45■■□□□ 1.66
PTPN4-202ENST00000420482 ADORA2AP29274 412 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 PDE4BQ07343 736 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 IFNL3Q8IZI9 196 aa25.44■■□□□ 1.66
PTPN4-202ENST00000420482 STK11IPQ8N1F8 1099 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms