RNA–Protein interactions for RNA: ENST00000420163.1

SEC22C-206, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 4

Gene SEC22C, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-206ENST00000420163 RPAP3Q9H6T3 665 aaPredicted RBP19.63■□□□□ 0.73
SEC22C-206ENST00000420163 VCPKMTQ9H867 229 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 MTMR4Q9NYA4 1195 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 NYAP2Q9P242 653 aa19.63■□□□□ 0.73
SEC22C-206ENST00000420163 TSPY2A6NKD2 308 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 RANBP6O60518 1105 aaKnown RBP19.62■□□□□ 0.73
SEC22C-206ENST00000420163 HERVK_113P62684 666 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 LACTBP83111 547 aaPredicted RBP19.62■□□□□ 0.73
SEC22C-206ENST00000420163 MCOLN1Q9GZU1 580 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 SH2D4AQ9H788 454 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 IL17RBQ9NRM6 502 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 TOMM22Q9NS69 142 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 CLIP2Q9UDT6 1046 aa19.62■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L15C9J2P7 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L13C9JLJ4 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L11C9JVI0 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L18D6R9N7 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L22D6RA61 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L17D6RBQ6 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L19D6RCP7 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L20D6RJB6 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 USP17L24Q0WX57 530 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 CATSPERGQ6ZRH7 1159 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 OTOP1Q7RTM1 612 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 LRRC47Q8N1G4 583 aaKnown RBP19.61■□□□□ 0.73
SEC22C-206ENST00000420163 ANKRD13CQ8N6S4 541 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 CTNNA3Q9UI47 895 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 TAF6LQ9Y6J9 622 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 HTTP42858 3142 aa19.61■□□□□ 0.73
SEC22C-206ENST00000420163 CDC45O75419 566 aa19.6■□□□□ 0.73
SEC22C-206ENST00000420163 IMMTQ16891 758 aaKnown RBP19.6■□□□□ 0.73
SEC22C-206ENST00000420163 MFSD6Q6ZSS7 791 aa19.6■□□□□ 0.73
SEC22C-206ENST00000420163 LSG1Q9H089 658 aaKnown RBP19.6■□□□□ 0.73
SEC22C-206ENST00000420163 TXNRD2Q9NNW7 524 aa19.6■□□□□ 0.73
SEC22C-206ENST00000420163 TRIM17Q9Y577 477 aa19.6■□□□□ 0.73
SEC22C-206ENST00000420163 RAD21O60216 631 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 TTLL1O95922 423 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 CYP21A2P08686 494 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 LPAR1Q92633 364 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 MKL1Q969V6 931 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 TANGO6Q9C0B7 1094 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 PLXNB2O15031 1838 aa19.59■□□□□ 0.73
SEC22C-206ENST00000420163 SPDYE16A6NNV3 312 aaPredicted RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 WDR46O15213 610 aaKnown RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 NDUFB10O96000 172 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 PCP11498 1178 aaKnown RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 GCLCP48506 637 aaPredicted RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 FAM110CQ1W6H9 321 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 MAP4K1Q92918 833 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 TRIM47Q96LD4 638 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 NUP88Q99567 741 aaPredicted RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 RNF41Q9H4P4 317 aaPredicted RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 EFCC1Q9HA90 598 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 GOPCQ9HD26 462 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 RBPJLQ9UBG7 517 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 MORF4L1Q9UBU8 362 aa19.58■□□□□ 0.72
SEC22C-206ENST00000420163 RBM8AQ9Y5S9 174 aaKnown RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 U3KPZ7 1027 aaPredicted RBP19.58■□□□□ 0.72
SEC22C-206ENST00000420163 F5H6K3 240 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 PSMC4P43686 418 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 NOVP48745 357 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 KLRC3Q07444 240 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 FAM83BQ5T0W9 1011 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 RASGRP2Q7LDG7 609 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 STX8Q9UNK0 236 aa19.57■□□□□ 0.72
SEC22C-206ENST00000420163 B4E1Z4 1266 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 KDM4AO75164 1064 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 CNMDO75829 334 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 PAGR1Q9BTK6 254 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 ANO2Q9NQ90 1003 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 FBXO28Q9NVF7 368 aa19.56■□□□□ 0.72
SEC22C-206ENST00000420163 FLOT1O75955 427 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 KIF22Q14807 665 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 Q3C1V9 767 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 RCSD1Q6JBY9 416 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 KIAA1211Q6ZU35 1233 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 STOX1Q6ZVD7 989 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 GMCL1P1Q8NEA9 526 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 ESR2Q92731 530 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 CHMP4CQ96CF2 233 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 ZKSCAN3Q9BRR0 538 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 TCP11L1Q9NUJ3 509 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 BTBD7Q9P203 1132 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 SYNPO2Q9UMS6 1093 aa19.55■□□□□ 0.72
SEC22C-206ENST00000420163 FMNL1O95466 1100 aaPredicted RBP19.54■□□□□ 0.72
SEC22C-206ENST00000420163 DSG3P32926 999 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 ERVK-9P63128 1117 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 ERVK-24P63145 666 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 COG2Q14746 738 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 SLFN13Q68D06 897 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 FBXO46Q6PJ61 603 aaPredicted RBP19.54■□□□□ 0.72
SEC22C-206ENST00000420163 SAMD1Q6SPF0 538 aaPredicted RBP19.54■□□□□ 0.72
SEC22C-206ENST00000420163 LBX2Q6XYB7 198 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 ATG4CQ96DT6 458 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 ABHD8Q96I13 439 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 PTPN22Q9Y2R2 807 aa19.54■□□□□ 0.72
SEC22C-206ENST00000420163 FCGRTP55899 365 aa19.53■□□□□ 0.72
SEC22C-206ENST00000420163 GPRC5AQ8NFJ5 357 aa19.53■□□□□ 0.72
SEC22C-206ENST00000420163 GTF3C2Q8WUA4 911 aaPredicted RBP19.53■□□□□ 0.72
SEC22C-206ENST00000420163 TMEM47Q9BQJ4 181 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms