RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 API5Q9BZZ5 524 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 GPRC5DQ9NZD1 345 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 NOB1Q9ULX3 412 aaKnown RBP8.69□□□□□ -1.02
HMGN1-205ENST00000419378 ZBED9Q6R2W3 1325 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 KIF16BQ96L93 1317 aa8.69□□□□□ -1.02
HMGN1-205ENST00000419378 WTIPA6NIX2 430 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-205ENST00000419378 SOBPA7XYQ1 873 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 MAN1A2O60476 641 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 MSX1P28360 303 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 CHRNDQ07001 517 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 CCDC57Q2TAC2 916 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 RABL6Q3YEC7 729 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-205ENST00000419378 ETFBKMTQ8IXQ9 262 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 FOXD4L4Q8WXT5 416 aaPredicted RBP8.68□□□□□ -1.02
HMGN1-205ENST00000419378 ANKRD2Q9GZV1 360 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 USP44Q9H0E7 712 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 PSME4Q14997 1843 aa8.68□□□□□ -1.02
HMGN1-205ENST00000419378 A0A1B0GTH6 734 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ZNF804BA4D1E1 1349 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 PSMD14O00487 310 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ZNF609O15014 1411 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 MAPK1P28482 360 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 HTRA3P83110 453 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 AAMPQ13685 434 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
HMGN1-205ENST00000419378 TAF7LQ5H9L4 462 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 DNAJC14Q6Y2X3 702 aaPredicted RBP8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ATCAYQ86WG3 371 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ANKRD44Q8N8A2 993 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 BICC1Q9H694 974 aaKnown RBP8.67□□□□□ -1.02
HMGN1-205ENST00000419378 KCNQ5Q9NR82 932 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ADARB2Q9NS39 739 aaKnown RBP8.67□□□□□ -1.02
HMGN1-205ENST00000419378 DCTN4Q9UJW0 460 aa8.67□□□□□ -1.02
HMGN1-205ENST00000419378 ZNF646O15015 1829 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-205ENST00000419378 PASKQ96RG2 1323 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 SHTN1A0MZ66 631 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 BCAR3O75815 825 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 KLRK1P26718 216 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 KCNJ4P48050 445 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 ARSJQ5FYB0 599 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-205ENST00000419378 ALKBH2Q6NS38 261 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 LDHAL6AQ6ZMR3 332 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 USP50Q70EL3 339 aaPredicted RBP8.66□□□□□ -1.02
HMGN1-205ENST00000419378 TXNRD3Q86VQ6 643 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 ZNF280CQ8ND82 737 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 ARHGAP45Q92619 1136 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 HSH2DQ96JZ2 352 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 SUSD3Q96L08 255 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 ZIC5Q96T25 663 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 GPAMQ9HCL2 828 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 LEMD3Q9Y2U8 911 aa8.66□□□□□ -1.02
HMGN1-205ENST00000419378 IRS2Q9Y4H2 1338 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 FZD6O60353 706 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 TAF5LO75529 589 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 TRIM27P14373 513 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 RPS12P25398 132 aaKnown RBP8.65□□□□□ -1.02
HMGN1-205ENST00000419378 MAP1SQ66K74 1059 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-205ENST00000419378 PODNQ7Z5L7 613 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 TREML1Q86YW5 311 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 TRPM4Q8TD43 1214 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 DPF2Q92785 391 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 GAS2L1Q99501 681 aaPredicted RBP8.65□□□□□ -1.02
HMGN1-205ENST00000419378 CNNM1Q9NRU3 951 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 CNOT7Q9UIV1 285 aaKnown RBP8.65□□□□□ -1.02
HMGN1-205ENST00000419378 DYRK1BQ9Y463 629 aa8.65□□□□□ -1.02
HMGN1-205ENST00000419378 H7C1D1 291 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 SNAP23O00161 211 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 VIL1P09327 827 aaKnown RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 UBTFL1P0CB47 393 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 ZAP70P43403 619 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 INTS3Q68E01 1043 aaKnown RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 ATF7IPQ6VMQ6 1270 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 LRRC69Q6ZNQ3 347 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 CNTROBQ8N137 903 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 DNAJC5GQ8N7S2 189 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 FRAT1Q92837 279 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 MEIS3Q99687 375 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 PUS3Q9BZE2 481 aaKnown RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 COA1Q9GZY4 146 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 RUBCNLQ9H714 662 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 BRPF3Q9ULD4 1205 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 TNNQ9UQP3 1299 aa8.64□□□□□ -1.03
HMGN1-205ENST00000419378 GPC6Q9Y625 555 aaPredicted RBP8.64□□□□□ -1.03
HMGN1-205ENST00000419378 MROH5Q6ZUA9 1318 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 A0A1W2PNR3 127 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 ANKRD33BA6NCL7 494 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 TGFBR3LH3BV60 316 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 IPO8O15397 1037 aaKnown RBP8.63□□□□□ -1.03
HMGN1-205ENST00000419378 NDUFB5O43674 189 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 PLIN1O60240 522 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 MICAL2O94851 1124 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 EGFRP00533 1210 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 F11P03951 625 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 HIF1AQ16665 826 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 DACT2Q5SW24 774 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 C15orf52Q6ZUT6 534 aaKnown RBP8.63□□□□□ -1.03
HMGN1-205ENST00000419378 AGBL3Q8NEM8 1001 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 NEUROD4Q9HD90 331 aa8.63□□□□□ -1.03
HMGN1-205ENST00000419378 LRRFIP2Q9Y608 721 aaKnown RBP8.63□□□□□ -1.03
HMGN1-205ENST00000419378 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms