RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 MFSD6Q6ZSS7 791 aa22.09■■□□□ 1.13
PTCD3-204ENST00000418628 HTTP42858 3142 aa22.09■■□□□ 1.13
PTCD3-204ENST00000418628 SMCHD1A6NHR9 2005 aa22.09■■□□□ 1.13
PTCD3-204ENST00000418628 FKTNO75072 461 aa22.08■■□□□ 1.13
PTCD3-204ENST00000418628 CAP1Q01518 475 aa22.08■■□□□ 1.13
PTCD3-204ENST00000418628 TCP11L1Q9NUJ3 509 aa22.08■■□□□ 1.13
PTCD3-204ENST00000418628 ZNF236Q9UL36 1845 aa22.08■■□□□ 1.12
PTCD3-204ENST00000418628 TSPY2A6NKD2 308 aa22.07■■□□□ 1.12
PTCD3-204ENST00000418628 TTLL1O95922 423 aa22.07■■□□□ 1.12
PTCD3-204ENST00000418628 POTEEQ6S8J3 1075 aa22.07■■□□□ 1.12
PTCD3-204ENST00000418628 RBM8AQ9Y5S9 174 aaKnown RBP22.07■■□□□ 1.12
PTCD3-204ENST00000418628 TAF6LQ9Y6J9 622 aa22.07■■□□□ 1.12
PTCD3-204ENST00000418628 WDR46O15213 610 aaKnown RBP22.06■■□□□ 1.12
PTCD3-204ENST00000418628 RANBP6O60518 1105 aaKnown RBP22.06■■□□□ 1.12
PTCD3-204ENST00000418628 NMT2O60551 498 aa22.06■■□□□ 1.12
PTCD3-204ENST00000418628 LBX2Q6XYB7 198 aa22.06■■□□□ 1.12
PTCD3-204ENST00000418628 CATSPERGQ6ZRH7 1159 aa22.06■■□□□ 1.12
PTCD3-204ENST00000418628 PLXNA1Q9UIW2 1896 aa22.06■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L15C9J2P7 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L13C9JLJ4 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L11C9JVI0 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L18D6R9N7 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L22D6RA61 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L17D6RBQ6 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L19D6RCP7 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L20D6RJB6 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 SP3Q02447 781 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 USP17L24Q0WX57 530 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 PPP4R3BQ5MIZ7 849 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 COL13A1Q5TAT6 717 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-204ENST00000418628 CASC1Q6TDU7 716 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 GMCL1P1Q8NEA9 526 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 RPAP3Q9H6T3 665 aaPredicted RBP22.05■■□□□ 1.12
PTCD3-204ENST00000418628 CPA4Q9UI42 421 aa22.05■■□□□ 1.12
PTCD3-204ENST00000418628 RBBP6Q7Z6E9 1792 aaKnown RBP22.04■■□□□ 1.12
PTCD3-204ENST00000418628 OSBPP22059 807 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 GCLCP48506 637 aaPredicted RBP22.04■■□□□ 1.12
PTCD3-204ENST00000418628 HERVK_113P62684 666 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 IRX3P78415 501 aaPredicted RBP22.04■■□□□ 1.12
PTCD3-204ENST00000418628 NECTIN1Q15223 517 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 FAM110CQ1W6H9 321 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 RRP12Q5JTH9 1297 aaKnown RBP22.04■■□□□ 1.12
PTCD3-204ENST00000418628 RCSD1Q6JBY9 416 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 STOX1Q6ZVD7 989 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 ESR2Q92731 530 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 P2RX7Q99572 595 aaKnown RBP22.04■■□□□ 1.12
PTCD3-204ENST00000418628 CNNM2Q9H8M5 875 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 GOPCQ9HD26 462 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 ANO2Q9NQ90 1003 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 MORF4L1Q9UBU8 362 aa22.04■■□□□ 1.12
PTCD3-204ENST00000418628 NDUFB10O96000 172 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 LACTBP83111 547 aaPredicted RBP22.03■■□□□ 1.12
PTCD3-204ENST00000418628 KIAA1211Q6ZU35 1233 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 SMCR8Q8TEV9 937 aaPredicted RBP22.03■■□□□ 1.12
PTCD3-204ENST00000418628 ERO1AQ96HE7 468 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 TOMM22Q9NS69 142 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 CLIP2Q9UDT6 1046 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 MYPNQ86TC9 1320 aa22.03■■□□□ 1.12
PTCD3-204ENST00000418628 SPDYE16A6NNV3 312 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-204ENST00000418628 B4E1Z4 1266 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 KDM4AO75164 1064 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 CTGFP29279 349 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 ATP2B2Q01814 1243 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 SPICE1Q8N0Z3 855 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 LRRC47Q8N1G4 583 aaKnown RBP22.02■■□□□ 1.12
PTCD3-204ENST00000418628 GTF3C2Q8WUA4 911 aaPredicted RBP22.02■■□□□ 1.12
PTCD3-204ENST00000418628 KRT23Q9C075 422 aa22.02■■□□□ 1.12
PTCD3-204ENST00000418628 F5H6K3 240 aa22.01■■□□□ 1.11
PTCD3-204ENST00000418628 KLRC3Q07444 240 aa22.01■■□□□ 1.11
PTCD3-204ENST00000418628 CD99L2Q8TCZ2 262 aa22.01■■□□□ 1.11
PTCD3-204ENST00000418628 TXNRD2Q9NNW7 524 aa22.01■■□□□ 1.11
PTCD3-204ENST00000418628 E7EWF7 191 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 SLC27A2O14975 620 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 CNMDO75829 334 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 CTU1Q7Z7A3 348 aaKnown RBP22■■□□□ 1.11
PTCD3-204ENST00000418628 ANKRD13CQ8N6S4 541 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 ANKS1AQ92625 1134 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 TTC14Q96N46 770 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 ZSWIM5Q9P217 1185 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 RBPJLQ9UBG7 517 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 ADAMTS5Q9UNA0 930 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 STX8Q9UNK0 236 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 LCTP09848 1927 aa22■■□□□ 1.11
PTCD3-204ENST00000418628 CREB3L3Q68CJ9 461 aa21.99■■□□□ 1.11
PTCD3-204ENST00000418628 MB21D2Q8IYB1 491 aaPredicted RBP21.99■■□□□ 1.11
PTCD3-204ENST00000418628 GMCL1Q96IK5 515 aa21.99■■□□□ 1.11
PTCD3-204ENST00000418628 TMEM47Q9BQJ4 181 aa21.99■■□□□ 1.11
PTCD3-204ENST00000418628 TANGO6Q9C0B7 1094 aa21.99■■□□□ 1.11
PTCD3-204ENST00000418628 ARHGAP39Q9C0H5 1083 aa21.99■■□□□ 1.11
PTCD3-204ENST00000418628 BAZ2BQ9UIF8 2168 aaKnown RBP21.98■■□□□ 1.11
PTCD3-204ENST00000418628 EPB41L2O43491 1005 aaKnown RBP21.98■■□□□ 1.11
PTCD3-204ENST00000418628 TOP1P11387 765 aaKnown RBP21.98■■□□□ 1.11
PTCD3-204ENST00000418628 DSG3P32926 999 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 COG2Q14746 738 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 FAM83BQ5T0W9 1011 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 CYB5R4Q7L1T6 521 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 OTOP1Q7RTM1 612 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 DGKHQ86XP1 1220 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 KCNB2Q92953 911 aa21.98■■□□□ 1.11
PTCD3-204ENST00000418628 SEC23AQ15436 765 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms