RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 INTS4Q96HW7 963 aaKnown RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 SMCO2A6NFE2 343 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 CUTAO60888 179 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 GPIHBP1Q8IV16 184 aa12.41□□□□□ -0.42
PTCH1-205ENST00000418258 SKA2Q8WVK7 121 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-205ENST00000418258 ZAP70P43403 619 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 CYP2J2P51589 502 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 PPP2R3AQ06190 1150 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 SCYL2Q6P3W7 929 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 RPS6KC1Q96S38 1066 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 LGSNQ5TDP6 509 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 SUGCTQ9HAC7 445 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 SEPT10Q9P0V9 454 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 ARPP21Q9UBL0 812 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 FLOT1O75955 427 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 RPS8P62241 208 aaKnown RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 DMP1Q13316 513 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 NELFBQ8WX92 580 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 UGGT2Q9NYU1 1516 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 TNNC2P02585 160 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 ATF7P17544 494 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 ATP11AP98196 1134 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 DIXDC1Q155Q3 683 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 DIS3L2Q8IYB7 885 aaKnown RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 PCDHB13Q9Y5F0 798 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 I3L4J1 428 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 PRR16Q569H4 304 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 SYCE1Q8N0S2 351 aa12.4□□□□□ -0.42
PTCH1-205ENST00000418258 NAPGQ99747 312 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 POLGP54098 1239 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 LACTBP83111 547 aaPredicted RBP12.4□□□□□ -0.42
PTCH1-205ENST00000418258 COL17A1Q9UMD9 1497 aaPredicted RBP12.4□□□□□ -0.43
PTCH1-205ENST00000418258 MAST1Q9Y2H9 1570 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 ZNF131P52739 623 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 POSTNQ15063 836 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC105Q8IYK2 499 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 KCNJ14Q9UNX9 436 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 POLR3AO14802 1390 aaPredicted RBP12.39□□□□□ -0.43
PTCH1-205ENST00000418258 ZNF202O95125 648 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 NBPF11Q86T75 865 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 IFT20Q8IY31 132 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 IWS1Q96ST2 819 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 NUF2Q9BZD4 464 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 NT5C3AQ9H0P0 336 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 EDC4Q6P2E9 1401 aaKnown RBP12.39□□□□□ -0.43
PTCH1-205ENST00000418258 MYO5CQ9NQX4 1742 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 RPS6KA2Q15349 733 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 LRRC47Q8N1G4 583 aaKnown RBP12.39□□□□□ -0.43
PTCH1-205ENST00000418258 USP26Q9BXU7 913 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 PSMB7Q99436 277 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 MRPL11Q9Y3B7 192 aaKnown RBP12.39□□□□□ -0.43
PTCH1-205ENST00000418258 POLR2MP0CAP2 368 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 NEDD9Q14511 834 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 CCDC62Q6P9F0 684 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 ANKFY1Q9P2R3 1169 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 PPP2R5BQ15173 497 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 XKR9Q5GH70 373 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 SFMBT2Q5VUG0 894 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 KBTBD3Q8NAB2 608 aa12.39□□□□□ -0.43
PTCH1-205ENST00000418258 KLHL30Q0D2K2 578 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 NAA25Q14CX7 972 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 SUCLG2Q96I99 432 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 RTEL1Q9NZ71 1219 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 TNNQ9UQP3 1299 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 STAM2O75886 525 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 ADGBQ8N7X0 1667 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 ZBTB40Q9NUA8 1239 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 HGSO14964 777 aaPredicted RBP12.38□□□□□ -0.43
PTCH1-205ENST00000418258 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 RBSNQ9H1K0 784 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 CFAP43Q8NDM7 1665 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 ESYT2A0FGR8 921 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 XRCC6P12956 609 aaKnown RBP eCLIP12.38□□□□□ -0.43
PTCH1-205ENST00000418258 BLZF1Q9H2G9 400 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 GNA14O95837 355 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 ATXN8OSP0DMR3 200 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 GPBP1Q86WP2 473 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 APOL6Q9BWW8 343 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 TRAPPC8Q9Y2L5 1435 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 TECP42680 631 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 PPARAQ07869 468 aa12.38□□□□□ -0.43
PTCH1-205ENST00000418258 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
PTCH1-205ENST00000418258 MYCP01106 439 aaPredicted RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 XRCC5P13010 732 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 ATP2B4P23634 1241 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 Q3C1V9 767 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 SLFN12Q8IYM2 578 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 ARHGEF2Q92974 986 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 QTRT2Q9H974 415 aaKnown RBP12.37□□□□□ -0.43
PTCH1-205ENST00000418258 K7ENM7 598 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CEP104O60308 925 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 HHATQ5VTY9 493 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 CCPG1Q9ULG6 757 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 TUBBP07437 444 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 PPARDQ03181 441 aa12.37□□□□□ -0.43
PTCH1-205ENST00000418258 RILPQ96NA2 401 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms