RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 REC114Q7Z4M0 266 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 CREG2Q8IUH2 290 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 PHACTR4Q8IZ21 702 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 FLAD1Q8NFF5 587 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 PIWIL2Q8TC59 973 aaKnown RBP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 CTNND2Q9UQB3 1225 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 POLR3KQ9Y2Y1 108 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 AQRO60306 1485 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 FHAD1B1AJZ9 1412 aa5.81□□□□□ -1.48
HMGB3P20-201ENST00000417997 MAGI1Q96QZ7 1491 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 WASH4PA8MWX3 477 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 EIF4A3P38919 411 aaKnown RBP5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 AFMP43652 599 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 MPP2Q14168 576 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 ZNF648Q5T619 568 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 LCE3BQ5TA77 95 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 FBXL19Q6PCT2 694 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 FAM196AQ6ZSG2 479 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 HS2ST1Q7LGA3 356 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 ERMP1Q7Z2K6 904 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 ZSWIM9Q86XI8 627 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 KRTAP19-1Q8IUB9 90 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 BAHD1Q8TBE0 780 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 PPP1R13LQ8WUF5 828 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 Q96M66 194 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 KCNH3Q9ULD8 1083 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 SUPT16HQ9Y5B9 1047 aaKnown RBP5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 VPS8Q8N3P4 1428 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 IQGAP2Q13576 1575 aa5.8□□□□□ -1.48
HMGB3P20-201ENST00000417997 CHD1O14646 1710 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 ARAP1Q96P48 1450 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 LRRN2O75325 713 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 GARTP22102 1010 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 TPP2P29144 1249 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 POU5F2Q8N7G0 328 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 ZNF296Q8WUU4 475 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 KIRREL1Q96J84 757 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 ALPK1Q96QP1 1244 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 KIF2CQ99661 725 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 TRIT1Q9H3H1 467 aaKnown RBP5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 BRMS1Q9HCU9 246 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 GPATCH2Q9NW75 528 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 CFAP43Q8NDM7 1665 aa5.79□□□□□ -1.48
HMGB3P20-201ENST00000417997 ARHGAP35Q9NRY4 1499 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 LRRC10BA6NIK2 292 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 PCF11O94913 1555 aaKnown RBP5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 LTKP29376 864 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 GBP1P32455 592 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 HK2P52789 917 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 SAMD9Q5K651 1589 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 FYB2Q5VWT5 728 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 MPZL3Q6UWV2 235 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 TMPRSS7Q7RTY8 843 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 TTC6Q86TZ1 520 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 KRTAP1-3Q8IUG1 177 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 SLFN12Q8IYM2 578 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 DTWD2Q8NBA8 298 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 TMEM87AQ8NBN3 555 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 TMEM40Q8WWA1 233 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 CCDC120Q96HB5 630 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 CCDC74BQ96LY2 380 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 DUSP13Q9UII6 198 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 PCDHB14Q9Y5E9 798 aa5.78□□□□□ -1.48
HMGB3P20-201ENST00000417997 GRIN2AQ12879 1464 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 PRR36Q9H6K5 1346 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 DNAJA2O60884 412 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 C8AP07357 584 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 RAC2P15153 192 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 MCM4P33991 863 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 MRPL58Q14197 206 aaKnown RBP5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 MLANAQ16655 118 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 SEZ6Q53EL9 994 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 ARSHQ5FYA8 562 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 TMEM67Q5HYA8 995 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 RALGPS1Q5JS13 557 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 RNF141Q8WVD5 230 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 LIN37Q96GY3 246 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 KREMEN1Q96MU8 473 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 DUSP15Q9H1R2 295 aaPredicted RBP5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 SYNJ2O15056 1496 aa5.77□□□□□ -1.49
HMGB3P20-201ENST00000417997 DNAJC25-GNG10A0A024R161 153 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 FARP2O94887 1054 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 ESR1P03372 595 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 RAG1P15918 1043 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 ZNF16P17020 682 aaPredicted RBP5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 GDNFP39905 211 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 CRKP46108 304 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 EGR3Q06889 387 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 APOBRQ0VD83 1088 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 PKN1Q16512 942 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 CLEC16AQ2KHT3 1053 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 GK5Q6ZS86 529 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 KSR1Q8IVT5 923 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 UBP1Q9NZI7 540 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 ADAMTS1Q9UHI8 967 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 ROBO2Q9HCK4 1378 aa5.76□□□□□ -1.49
HMGB3P20-201ENST00000417997 SLC22A31A6NKX4 558 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 GREM1O60565 184 aa5.75□□□□□ -1.49
HMGB3P20-201ENST00000417997 GLI1P08151 1106 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms