RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 HPS1Q92902 700 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 L3MBTL2Q969R5 705 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 CLMNQ96JQ2 1002 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 DEFB118Q96PH6 123 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 RBCK1Q9BYM8 510 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 MYOZ2Q9NPC6 264 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 TAF1P21675 1872 aa7.13□□□□□ -1.27
ECHDC1-206ENST00000417628 RGS20O76081 388 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 VIL1P09327 827 aaKnown RBP7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 KCTD2Q14681 263 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 TMC7Q7Z402 723 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 SP8Q8IXZ3 490 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 ALDH16A1Q8IZ83 802 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 PPM1EQ8WY54 764 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 ZSCAN10Q96SZ4 725 aaPredicted RBP7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 GRIP2Q9C0E4 1043 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 KCNH6Q9H252 994 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 ZNF232Q9UNY5 417 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 CHMP3Q9Y3E7 222 aa7.12□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR33A8MZF0 331 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 RNMTO43148 476 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 TLR2O60603 784 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 ERMP1Q7Z2K6 904 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 AGBL3Q8NEM8 1001 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 MRRFQ96E11 262 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 LBHD1Q9BQE6 289 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 NIFKQ9BYG3 293 aaKnown RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 PHACTR1Q9C0D0 580 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 C11orf49Q9H6J7 331 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 LGR6Q9HBX8 967 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 PAK6Q9NQU5 681 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 KCNQ5Q9NR82 932 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 FZD1Q9UP38 647 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 PKD1L2Q7Z442 2459 aa7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 COL1A1P02452 1464 aaPredicted RBP7.11□□□□□ -1.27
ECHDC1-206ENST00000417628 NDUFB5O43674 189 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 BBOX1O75936 387 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 IGHA2P01877 340 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 ITGB8P26012 769 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PSMC4P43686 418 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR20EP86478 221 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR20CP86479 221 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR20DP86480 221 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR20BP86481 221 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 PRR20AP86496 221 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 COL19A1Q14993 1142 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 RTN1Q16799 776 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 AKNAD1Q5T1N1 836 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 ALKBH2Q6NS38 261 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 TMEM214Q6NUQ4 689 aaKnown RBP7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 ATCAYQ86WG3 371 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 ETFBKMTQ8IXQ9 262 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 BRI3BPQ8WY22 251 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 CCDC136Q96JN2 1154 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 FBXL18Q96ME1 805 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 IGSF5Q9NSI5 407 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 KLK14Q9P0G3 267 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 BRPF3Q9ULD4 1205 aa7.1□□□□□ -1.27
ECHDC1-206ENST00000417628 CCL15-CCL14A0A0B4J2E2 113 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 BMP1P13497 986 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 CTGFP29279 349 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 GPC1P35052 558 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 TXLNAP40222 546 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 RNF144AP50876 292 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 PRKCZQ05513 592 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 GRIN2CQ14957 1233 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 CCL15Q16663 113 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 NBPF9Q3BBW0 867 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 C11orf91Q3C1V1 193 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 APOBEC3FQ8IUX4 373 aaKnown RBP7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 FAM43AQ8N2R8 423 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 RHBDD1Q8TEB9 315 aa7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 INSM2Q96T92 566 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 GAS2L1Q99501 681 aaPredicted RBP7.09□□□□□ -1.27
ECHDC1-206ENST00000417628 DDX60LQ5H9U9 1706 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 SPINT1O43278 529 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 TREHO43280 583 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 P4HBP07237 508 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 PIP4K2AP48426 406 aaPredicted RBP7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 DSC3Q14574 896 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 AAK1Q2M2I8 961 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 C4orf17Q53FE4 359 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 C1orf53Q5VUE5 145 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 OPTNQ96CV9 577 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 IFT43Q96FT9 208 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 CITED4Q96RK1 184 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 EYA3Q99504 573 aa7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 TSEN34Q9BSV6 310 aaKnown RBP7.08□□□□□ -1.28
ECHDC1-206ENST00000417628 LRRC37AA6NMS7 1700 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 COL3A1P02461 1466 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 ADCY3O60266 1144 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 CTSOP43234 321 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 IREB2P48200 963 aaKnown RBP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 GTF2A2P52657 109 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 SHHQ15465 462 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 HLFQ16534 295 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 ZNF790Q6PG37 636 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 ANKRD13AQ8IZ07 590 aa7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 ZBTB38Q8NAP3 1195 aaPredicted RBP7.07□□□□□ -1.28
ECHDC1-206ENST00000417628 FMNL2Q96PY5 1086 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms