RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 ABL1P00519 1130 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 CASP14P31944 242 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 CAVIN4Q5BKX8 364 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 TMCO3Q6UWJ1 677 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 MARCH10Q8NA82 808 aaPredicted RBP16.46■□□□□ 0.22
HDAC9-208ENST00000417496 CCDC12Q8WUD4 166 aaPredicted RBP16.46■□□□□ 0.22
HDAC9-208ENST00000417496 TNFRSF25Q93038 417 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 MTRQ99707 1265 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 CTNND2Q9UQB3 1225 aa16.46■□□□□ 0.22
HDAC9-208ENST00000417496 XDHP47989 1333 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 TFRCP02786 760 aaKnown RBP16.45■□□□□ 0.22
HDAC9-208ENST00000417496 PPP2R3AQ06190 1150 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 TMTC3Q6ZXV5 915 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 MRFAP1Q9Y605 127 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 BCL9LQ86UU0 1499 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 ZRANB2O95218 330 aaKnown RBP eCLIP16.45■□□□□ 0.22
HDAC9-208ENST00000417496 FXR1P51114 621 aaKnown RBP eCLIP16.45■□□□□ 0.22
HDAC9-208ENST00000417496 PPFIBP1Q86W92 1011 aa16.45■□□□□ 0.22
HDAC9-208ENST00000417496 SRRTQ9BXP5 876 aaKnown RBP16.45■□□□□ 0.22
HDAC9-208ENST00000417496 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 RNF225M0QZC1 329 aaPredicted RBP16.44■□□□□ 0.22
HDAC9-208ENST00000417496 PRDX5P30044 214 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 NLRP5P59047 1200 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 MECOMQ03112 1051 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 ARAP2Q8WZ64 1704 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 TAF1P21675 1872 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 BCORQ6W2J9 1755 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 SASH3O75995 380 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 GTF2E1P29083 439 aaPredicted RBP16.44■□□□□ 0.22
HDAC9-208ENST00000417496 CDKAL1Q5VV42 579 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 SLC51AQ86UW1 340 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 FERMT2Q96AC1 680 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 GSDMAQ96QA5 445 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 BRIP1Q9BX63 1249 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 VPS16Q9H269 839 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 MTMR7Q9Y216 660 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 ADGRG1Q9Y653 693 aa16.44■□□□□ 0.22
HDAC9-208ENST00000417496 BAZ2AQ9UIF9 1905 aaKnown RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 CNTNAP5Q8WYK1 1306 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 POLR3GO15318 223 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 CCDC175P0C221 793 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 PPP2R5BQ15173 497 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 RRAGBQ5VZM2 374 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 RASGRP4Q8TDF6 673 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 NSUN4Q96CB9 384 aaKnown RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 BRMS1Q9HCU9 246 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 CICQ96RK0 1608 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 NHSL1Q5SYE7 1610 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 GYPCP04921 128 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 PBX1P40424 430 aa16.43■□□□□ 0.22
HDAC9-208ENST00000417496 ATP2C1P98194 919 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 CTCFLQ8NI51 663 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 GPKOWQ92917 476 aaPredicted RBP eCLIP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 ZCCHC17Q9NP64 241 aaKnown RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 DCP1AQ9NPI6 582 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 RBM28Q9NW13 759 aaKnown RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 BSDC1Q9NW68 430 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 ARGLU1Q9NWB6 273 aaPredicted RBP16.43■□□□□ 0.22
HDAC9-208ENST00000417496 GOLGA6L9A6NEM1 432 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 UBE4AQ14139 1066 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 E2F4Q16254 413 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 CCDC34Q96HJ3 373 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 PANX2Q96RD6 677 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 PARD6BQ9BYG5 372 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 PUF60Q9UHX1 559 aaKnown RBP16.42■□□□□ 0.22
HDAC9-208ENST00000417496 ACRBPQ8NEB7 543 aa16.42■□□□□ 0.22
HDAC9-208ENST00000417496 NOL10Q9BSC4 688 aaKnown RBP16.42■□□□□ 0.22
HDAC9-208ENST00000417496 MYH14Q7Z406 1995 aaKnown RBP16.41■□□□□ 0.22
HDAC9-208ENST00000417496 MFAP3LO75121 409 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 SCG2P13521 617 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 KRT31Q15323 416 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 TXNRD3Q86VQ6 643 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 PLIN2Q99541 437 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 GDAQ9Y2T3 454 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 TSPY2A6NKD2 308 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 N4BP3O15049 544 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 FGRP09769 529 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 PDXDC2PQ6P474 469 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 RSRC2Q7L4I2 434 aaKnown RBP16.41■□□□□ 0.22
HDAC9-208ENST00000417496 IQUBQ8NA54 791 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 EEF2KMTQ96G04 330 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 TAB2Q9NYJ8 693 aa16.41■□□□□ 0.22
HDAC9-208ENST00000417496 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.41■□□□□ 0.22
HDAC9-208ENST00000417496 PP2D1A8MPX8 630 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 TBC1D8O95759 1140 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 USP17L8P0C7I0 530 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 CALM1P0DP23 149 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 CALM2P0DP24 149 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 CALM3P0DP25 149 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 ZNF569Q5MCW4 686 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 CC2D1AQ6P1N0 951 aaPredicted RBP16.4■□□□□ 0.22
HDAC9-208ENST00000417496 STAG2Q8N3U4 1231 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 FAM205AQ6ZU69 1335 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 DDAH1O94760 285 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 FILIP1LQ4L180 1135 aa16.4■□□□□ 0.22
HDAC9-208ENST00000417496 MYH6P13533 1939 aa16.39■□□□□ 0.22
HDAC9-208ENST00000417496 DUOX1Q9NRD9 1551 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 ERVK-24P63145 666 aa16.39■□□□□ 0.21
HDAC9-208ENST00000417496 TBC1D9BQ66K14 1250 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms