RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 LOC285556D6RIA3 1793 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 ZNF213O14771 459 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 FOXP2O15409 715 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 FLOT1O75955 427 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 GNRH1P01148 92 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 FAM110CQ1W6H9 321 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 WDR78Q5VTH9 848 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 CATSPERGQ6ZRH7 1159 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 MFSD6Q6ZSS7 791 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 GPRC5AQ8NFJ5 357 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 GTF3C2Q8WUA4 911 aaPredicted RBP13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 LPAR1Q92633 364 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 COA7Q96BR5 231 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 CHMP4CQ96CF2 233 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 TRIM47Q96LD4 638 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 VCPKMTQ9H867 229 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 BIN2Q9UBW5 565 aaPredicted RBP13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 MYPNQ86TC9 1320 aa13.1□□□□□ -0.31
TM9SF4-203ENST00000417389 PEX10O60683 326 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 MYCP01106 439 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 CHMLP26374 656 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 CAP1Q01518 475 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 IMMTQ16891 758 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 SLC9C1Q4G0N8 1177 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 LRRC47Q8N1G4 583 aaKnown RBP13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 CEP95Q96GE4 821 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 RNF41Q9H4P4 317 aaPredicted RBP13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 CTNNA3Q9UI47 895 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 ANAPC4Q9UJX5 808 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 STX8Q9UNK0 236 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 MTMR7Q9Y216 660 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 PTCH2Q9Y6C5 1203 aa13.09□□□□□ -0.31
TM9SF4-203ENST00000417389 WDR46O15213 610 aaKnown RBP13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 TTLL1O95922 423 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 PRMT2P55345 433 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 CCNA1P78396 465 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 PRKCZQ05513 592 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 PLS1Q14651 629 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 COG2Q14746 738 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 PPP4R3BQ5MIZ7 849 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 FAM83BQ5T0W9 1011 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 KIAA1211Q6ZU35 1233 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 NBPF11Q86T75 865 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 SIAH1Q8IUQ4 282 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 NEDD1Q8NHV4 660 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 DSCC1Q9BVC3 393 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 MTMR4Q9NYA4 1195 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 HOXC10Q9NYD6 342 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 NYAP2Q9P242 653 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 SRRDQ9UH36 339 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 CTDP1Q9Y5B0 961 aaPredicted RBP13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 RAD50Q92878 1312 aa13.08□□□□□ -0.32
TM9SF4-203ENST00000417389 CTGFP29279 349 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 SOX10P56693 466 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 ERVK-9P63128 1117 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 ERVK-24P63145 666 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 IKQ13123 557 aaPredicted RBP13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 KIAA1755Q5JYT7 1200 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 AKNAD1Q5T1N1 836 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 ERICH6BQ5W0A0 696 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 CASC1Q6TDU7 716 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 NUP88Q99567 741 aaPredicted RBP13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 RABGAP1Q9Y3P9 1069 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 ZMYM6O95789 1325 aa13.07□□□□□ -0.32
TM9SF4-203ENST00000417389 SPDYE16A6NNV3 312 aaPredicted RBP13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 F5H6K3 240 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 ORC4O43929 436 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 NMT2O60551 498 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 KLRC3Q07444 240 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 TBC1D10CQ8IV04 446 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 SH3TC2Q8TF17 1288 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 ESR2Q92731 530 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 TXNRD2Q9NNW7 524 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 PPP4R2Q9NY27 417 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 RBPJLQ9UBG7 517 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 MORF4L1Q9UBU8 362 aa13.06□□□□□ -0.32
TM9SF4-203ENST00000417389 ZSWIM8A7E2V4 1837 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 IGKV6D-41A0A0C4DH26 115 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 NDUFB10O96000 172 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 PCP11498 1178 aaKnown RBP13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 MAPK4P31152 587 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 SLC4A3P48751 1232 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 FLT3LGP49771 235 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 SLFN13Q68D06 897 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 STAG1Q8WVM7 1258 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 ATG4CQ96DT6 458 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 TMEM106CQ9BVX2 250 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 IL25Q9H293 177 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 GABRQQ9UN88 632 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 IVNS1ABPQ9Y6Y0 642 aa13.05□□□□□ -0.32
TM9SF4-203ENST00000417389 SGSM2O43147 1006 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 ADCY3O60266 1144 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 GRK4P32298 578 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 DSG3P32926 999 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 TRDNQ13061 729 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 CCDC96Q2M329 555 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 Q3C1V9 767 aa13.04□□□□□ -0.32
TM9SF4-203ENST00000417389 BMP2KLQ5H9B9 411 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms