RNA–Protein interactions for RNA: ENST00000417352.5

COPS3-202, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-202ENST00000417352 TTC6Q86TZ1 520 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 CLASRPQ8N2M8 674 aaKnown RBP8.46□□□□□ -1.06
COPS3-202ENST00000417352 NUDT12Q9BQG2 462 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 LARP6Q9BRS8 491 aaKnown RBP8.46□□□□□ -1.06
COPS3-202ENST00000417352 WDR18Q9BV38 432 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.46□□□□□ -1.06
COPS3-202ENST00000417352 RBM27Q9P2N5 1060 aaKnown RBP8.46□□□□□ -1.06
COPS3-202ENST00000417352 SERPINB13Q9UIV8 391 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 ZBTB21Q9ULJ3 1066 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 CDK5RAP2Q96SN8 1893 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 CEP290O15078 2479 aa8.46□□□□□ -1.06
COPS3-202ENST00000417352 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 GOLIM4O00461 696 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 HMMRO75330 724 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 MS4A1P11836 297 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 ZKSCAN1P17029 563 aaPredicted RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 CNGA1P29973 690 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 TTF1Q15361 905 aaPredicted RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 SH3D19Q5HYK7 790 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 C7orf61Q8IZ16 206 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 RHPN1Q8TCX5 695 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 DIS3LQ8TF46 1054 aaKnown RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 ZNF512BQ96KM6 892 aaPredicted RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 CRNKL1Q9BZJ0 848 aaKnown RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 DNAJC18Q9H819 358 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 TXNRD2Q9NNW7 524 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 RTN4Q9NQC3 1192 aaKnown RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 MCM9Q9NXL9 1143 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 STAP2Q9UGK3 403 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 COG6Q9Y2V7 657 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 NOP58Q9Y2X3 529 aaKnown RBP8.45□□□□□ -1.06
COPS3-202ENST00000417352 RPTORQ8N122 1335 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 MAST2Q6P0Q8 1798 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 BRCA2P51587 3418 aa8.45□□□□□ -1.06
COPS3-202ENST00000417352 LOC285556D6RIA3 1793 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L15C9J2P7 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L13C9JLJ4 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L11C9JVI0 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L18D6R9N7 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L22D6RA61 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L17D6RBQ6 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L19D6RCP7 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L20D6RJB6 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 GLRX3O76003 335 aaKnown RBP8.44□□□□□ -1.06
COPS3-202ENST00000417352 SYN1P17600 705 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 MAPK4P31152 587 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 PLCD1P51178 756 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 ERVK-9P63128 1117 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 ERVK-24P63145 666 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 CCNA1P78396 465 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 ATP2B2Q01814 1243 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 USP17L24Q0WX57 530 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 PLS1Q14651 629 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 Q3C1V9 767 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 PLEKHH3Q7Z736 793 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 CERS3Q8IU89 383 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 ZBED2Q9BTP6 218 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 TANGO6Q9C0B7 1094 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 EMILIN3Q9NT22 766 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 RBPJLQ9UBG7 517 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 ZMYND8Q9ULU4 1186 aaPredicted RBP8.44□□□□□ -1.06
COPS3-202ENST00000417352 IVNS1ABPQ9Y6Y0 642 aa8.44□□□□□ -1.06
COPS3-202ENST00000417352 COL2A1P02458 1487 aaPredicted RBP8.44□□□□□ -1.06
COPS3-202ENST00000417352 FOCADQ5VW36 1801 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 PDE6AP16499 860 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 HOXA7P31268 230 aaPredicted RBP8.43□□□□□ -1.06
COPS3-202ENST00000417352 RGS2P41220 211 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 USP14P54578 494 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 CCL14Q16627 93 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 GPR142Q7Z601 462 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 AMOTL1Q8IY63 956 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 ACER1Q8TDN7 264 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 SDR42E1Q8WUS8 393 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 SOCS4Q8WXH5 440 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 TRIB2Q92519 343 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 ZDHHC16Q969W1 377 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 DDX27Q96GQ7 796 aaKnown RBP8.43□□□□□ -1.06
COPS3-202ENST00000417352 DDRGK1Q96HY6 314 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 PORCNQ9H237 461 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 BOLA2Q9H3K6 86 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 C11orf49Q9H6J7 331 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 RPAP3Q9H6T3 665 aaPredicted RBP8.43□□□□□ -1.06
COPS3-202ENST00000417352 PAK6Q9NQU5 681 aaPredicted RBP8.43□□□□□ -1.06
COPS3-202ENST00000417352 GINM1Q9NU53 330 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 GJD2Q9UKL4 321 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 ZNF532Q9HCE3 1301 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 SIPA1L1O43166 1804 aa8.43□□□□□ -1.06
COPS3-202ENST00000417352 GOLGA8CPA6NN73 597 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 CCND3P30281 292 aaPredicted RBP8.42□□□□□ -1.06
COPS3-202ENST00000417352 SLC4A3P48751 1232 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 CACNB2Q08289 660 aaPredicted RBP8.42□□□□□ -1.06
COPS3-202ENST00000417352 SEPT2Q15019 361 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 MFSD14CQ5VZR4 134 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 DPP9Q86TI2 863 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 RPAP2Q8IXW5 612 aaPredicted RBP8.42□□□□□ -1.06
COPS3-202ENST00000417352 TRMT44Q8IYL2 757 aaKnown RBP8.42□□□□□ -1.06
COPS3-202ENST00000417352 STK11IPQ8N1F8 1099 aa8.42□□□□□ -1.06
COPS3-202ENST00000417352 GTF3C2Q8WUA4 911 aaPredicted RBP8.42□□□□□ -1.06
COPS3-202ENST00000417352 KIF1BPQ96EK5 621 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms