RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.45■□□□□ 0.38
PHRF1-203ENST00000416188 TXKP42681 527 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 PLCB3Q01970 1234 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 UBE3CQ15386 1083 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 SLC15A2Q16348 729 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 ANO1Q5XXA6 986 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 KRT25Q7Z3Z0 450 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 PODNQ7Z5L7 613 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 LMBR1Q8WVP7 490 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 NBPF3Q9H094 633 aa17.45■□□□□ 0.38
PHRF1-203ENST00000416188 DHX36Q9H2U1 1008 aaKnown RBP17.45■□□□□ 0.38
PHRF1-203ENST00000416188 ARHGEF35A5YM69 484 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 TUBB4AP04350 444 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 LPXNO60711 386 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 UIMC1Q96RL1 719 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 CCPG1Q9ULG6 757 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 PDE4DQ08499 809 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 ZSCAN10Q96SZ4 725 aaPredicted RBP17.44■□□□□ 0.38
PHRF1-203ENST00000416188 SERPINB13Q9UIV8 391 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 MCF2L2Q86YR7 1114 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 PNMA1Q8ND90 353 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 PPP1R9BQ96SB3 815 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 RASAL2Q9UJF2 1139 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 PALD1Q9ULE6 856 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 SETD1BQ9UPS6 1966 aaKnown RBP17.44■□□□□ 0.38
PHRF1-203ENST00000416188 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 SLC16A10Q8TF71 515 aa17.44■□□□□ 0.38
PHRF1-203ENST00000416188 PAIP2Q9BPZ3 127 aaKnown RBP17.44■□□□□ 0.38
PHRF1-203ENST00000416188 TRAF5O00463 557 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 DCAF17Q5H9S7 520 aaPredicted RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 SV2BQ7L1I2 683 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 CCDC125Q86Z20 511 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 DIS3L2Q8IYB7 885 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 RBSNQ9H1K0 784 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 SASH1O94885 1247 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 RAPGEF1Q13905 1077 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 RC3H1Q5TC82 1133 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 FBXO11Q86XK2 927 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 ATRIPQ8WXE1 791 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 DBNLQ9UJU6 430 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 KCNH3Q9ULD8 1083 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 DYNLL1P63167 89 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 REXO1Q8N1G1 1221 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 PI4KBQ9UBF8 816 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 MAPK8IP1Q9UQF2 711 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 E7EWF7 191 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 RHOXF2BP0C7M4 288 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 HS1BP3Q53T59 392 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 CELF1Q92879 486 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 SEC62Q99442 399 aaKnown RBP17.43■□□□□ 0.38
PHRF1-203ENST00000416188 RHOXF2Q9BQY4 288 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 PRKAG2Q9UGJ0 569 aa17.43■□□□□ 0.38
PHRF1-203ENST00000416188 POLR2MP0CAP2 368 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 KRT26Q7Z3Y9 468 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 H7C1W4 665 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 GSTA5Q7RTV2 222 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 CNGA4Q8IV77 575 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-203ENST00000416188 FMNL1O95466 1100 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-203ENST00000416188 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.42■□□□□ 0.388e-7■■■□□ 17.4
PHRF1-203ENST00000416188 GOLGA8HP0CJ92 632 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 STRN3Q13033 797 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 ZNF654Q8IZM8 581 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 TSNARE1Q96NA8 513 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 BAG1Q99933 345 aaPredicted RBP17.42■□□□□ 0.38
PHRF1-203ENST00000416188 IQCGQ9H095 443 aaKnown RBP17.42■□□□□ 0.38
PHRF1-203ENST00000416188 VPS16Q9H269 839 aa17.42■□□□□ 0.38
PHRF1-203ENST00000416188 RFX1P22670 979 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 TERF1P54274 439 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 MAEAQ7L5Y9 396 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 CCDC77Q9BR77 488 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 LLPHQ9BRT6 129 aaKnown RBP17.41■□□□□ 0.38
PHRF1-203ENST00000416188 TRPC6Q9Y210 931 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 ZNF853P0CG23 659 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 CCDC65Q8IXS2 484 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 PHKBQ93100 1093 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 PLCD1P51178 756 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 TBC1D8BQ0IIM8 1120 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 EP400NLQ6ZTU2 488 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 CCDC50Q8IVM0 306 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 DDX12PQ92771 950 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 PPRC1Q5VV67 1664 aaKnown RBP17.41■□□□□ 0.38
PHRF1-203ENST00000416188 SMCO2A6NFE2 343 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 AKR1B15C9JRZ8 316 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-203ENST00000416188 IGSF3O75054 1194 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 CCDC122Q5T0U0 273 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 TICAM2Q86XR7 235 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 ZNF354CQ86Y25 554 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 MINPP1Q9UNW1 487 aa17.41■□□□□ 0.38
PHRF1-203ENST00000416188 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
PHRF1-203ENST00000416188 TNKSO95271 1327 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 SORBS3O60504 671 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 RPL13P26373 211 aaKnown RBP17.4■□□□□ 0.38
PHRF1-203ENST00000416188 KANSL2Q9H9L4 492 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 CTNND2Q9UQB3 1225 aa17.4■□□□□ 0.38
PHRF1-203ENST00000416188 POLR2DO15514 142 aaKnown RBP17.4■□□□□ 0.38
PHRF1-203ENST00000416188 IFT81Q8WYA0 676 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms