RNA–Protein interactions for RNA: ENST00000414786.6

SHANK3-202, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

TSL 5

Gene SHANK3, Length 7,394 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-202ENST00000414786 HNRNPCL1O60812 293 aaKnown RBP20.41■□□□□ 0.86
SHANK3-202ENST00000414786 GUCY2FP51841 1108 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 MMEL1Q495T6 779 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 A0A1B0GUL7 405 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 PPP2R3AQ06190 1150 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 HABP4Q5JVS0 413 aaKnown RBP20.41■□□□□ 0.86
SHANK3-202ENST00000414786 USP40Q9NVE5 1235 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 KCNJ14Q9UNX9 436 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 HAUS3Q68CZ6 603 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 CCDC87Q9NVE4 849 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 LIG4P49917 911 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 ATICP31939 592 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 ADCY1Q08828 1119 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 FGD4Q96M96 766 aa20.41■□□□□ 0.86
SHANK3-202ENST00000414786 CNNM4Q6P4Q7 775 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 MIER3Q7Z3K6 550 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 HACD3Q9P035 362 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 ADCY7P51828 1080 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 TYW1BQ6NUM6 668 aa20.4■□□□□ 0.86
SHANK3-202ENST00000414786 CLRN2A0PK11 232 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 LRRIQ4A6NIV6 560 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 ACTN4O43707 911 aaKnown RBP20.39■□□□□ 0.86
SHANK3-202ENST00000414786 S100BP04271 92 aaPredicted RBP20.39■□□□□ 0.86
SHANK3-202ENST00000414786 COBLO75128 1261 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 KIAA0825Q8IV33 1275 aa20.39■□□□□ 0.86
SHANK3-202ENST00000414786 U2AF1L4Q8WU68 220 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 KSR2Q6VAB6 950 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 RSRC2Q7L4I2 434 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 P4HA1P13674 534 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 LRRC47Q8N1G4 583 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 C8orf58Q8NAV2 365 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 N4BP2L2Q92802 583 aaPredicted RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 OPHN1O60890 802 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 FAM207AQ9NSI2 230 aaPredicted RBP20.39■□□□□ 0.85
SHANK3-202ENST00000414786 SLC5A4Q9NY91 659 aa20.39■□□□□ 0.85
SHANK3-202ENST00000414786 RTEL1Q9NZ71 1219 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 SUGT1Q9Y2Z0 365 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 COG7P83436 770 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 XKR9Q5GH70 373 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PLCB1Q9NQ66 1216 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PDE1AP54750 535 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 PHEXP78562 749 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC157Q569K6 752 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 GAS7O60861 476 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 LONRF2Q1L5Z9 754 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 ZBBXA8MT70 800 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 SLC7A5P2Q9GIP4 190 aa20.38■□□□□ 0.85
SHANK3-202ENST00000414786 TTF2Q9UNY4 1162 aaKnown RBP20.38■□□□□ 0.85
SHANK3-202ENST00000414786 TBCCQ15814 346 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 OSTNP61366 133 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 NKX1-1Q15270 411 aaPredicted RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TAOK1Q7L7X3 1001 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC127Q96BQ5 260 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 VCXQ9H320 206 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 G3BP2Q9UN86 482 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 IDI1Q13907 227 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 PRIM1P49642 420 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 NR1H4Q96RI1 486 aaPredicted RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 LSM14BQ9BX40 385 aaKnown RBP20.37■□□□□ 0.85
SHANK3-202ENST00000414786 USH1CQ9Y6N9 552 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 IQCB1Q15051 598 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 C1orf228Q6PIY5 440 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 SPICE1Q8N0Z3 855 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 KIAA1107Q9UPP5 1409 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TMCO5AQ8N6Q1 288 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 ATP2A3Q93084 1043 aa20.37■□□□□ 0.85
SHANK3-202ENST00000414786 TMOD1P28289 359 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 CCDC13Q8IYE1 715 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 TRMT44Q8IYL2 757 aaKnown RBP20.36■□□□□ 0.85
SHANK3-202ENST00000414786 EXT2Q93063 718 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 PTPN22Q9Y2R2 807 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 LRWD1Q9UFC0 647 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 USP21Q9UK80 565 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 SYNRGQ9UMZ2 1314 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 GOLGA8HP0CJ92 632 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 GNGT2O14610 69 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 BUB1O43683 1085 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 NPR1P16066 1061 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 EVCP57679 992 aa20.36■□□□□ 0.85
SHANK3-202ENST00000414786 TNNC2P02585 160 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 K7ENM7 598 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 FAM180AQ6UWF9 173 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 OTUD6AQ7L8S5 288 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 NPHP3Q7Z494 1330 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 TTC21BQ7Z4L5 1316 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 KLHL30Q0D2K2 578 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 FTOQ9C0B1 505 aaKnown RBP eCLIP20.35■□□□□ 0.85
SHANK3-202ENST00000414786 PLCD1P51178 756 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 NUCB1Q02818 461 aa20.35■□□□□ 0.85
SHANK3-202ENST00000414786 BCRP11274 1271 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 CLNS1AP54105 237 aaKnown RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 RRAGAQ7L523 313 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 PEX26Q7Z412 305 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 AFAP1L1Q8TED9 768 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 FAM8A1Q9UBU6 413 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 POLGP54098 1239 aaPredicted RBP20.34■□□□□ 0.85
SHANK3-202ENST00000414786 HVCN1Q96D96 273 aa20.34■□□□□ 0.85
SHANK3-202ENST00000414786 VPS54Q9P1Q0 977 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms