RNA–Protein interactions for RNA: ENST00000414670.2

ITGB1-203, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 500 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-203ENST00000414670 CNTNAP1P78357 1384 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 PLIN4Q96Q06 1357 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 FER1L6Q2WGJ9 1857 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 CCDC88AQ3V6T2 1871 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 IGKV6D-41A0A0C4DH26 115 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 VPS37CA5D8V6 355 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 FAM196BA6NMK8 535 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 MPHOSPH10O00566 681 aaKnown RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 GRIN3BO60391 1043 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 PPFIA3O75145 1194 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 DDNO94850 711 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 SLURP2P0DP57 97 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 ZSCAN22P10073 491 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 TOP1P11387 765 aaKnown RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 FDPSP14324 419 aaKnown RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 IFNAR1P17181 557 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 NOVP48745 357 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 RASA3Q14644 834 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 NTRK3Q16288 839 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 CERKLQ49MI3 558 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 PPP4R3BQ5MIZ7 849 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 FOXD4L5Q5VV16 416 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 TATDN1Q6P1N9 297 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 PNMA1Q8ND90 353 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 CTCFLQ8NI51 663 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 FOXD4L4Q8WXT5 416 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 CEP95Q96GE4 821 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 TMEM47Q9BQJ4 181 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 TMEM39BQ9GZU3 492 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 DNAJC18Q9H819 358 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 SPTLC3Q9NUV7 552 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 RBM28Q9NW13 759 aaKnown RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 MTMR4Q9NYA4 1195 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 ORC3Q9UBD5 711 aaPredicted RBP7.22□□□□□ -1.25
ITGB1-203ENST00000414670 MTMR6Q9Y217 621 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 LAMA4Q16363 1823 aa7.22□□□□□ -1.25
ITGB1-203ENST00000414670 H3BQV1 296 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 TBC1D12O60347 775 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 FMNL1O95466 1100 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-203ENST00000414670 TTLL1O95922 423 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 F13A1P00488 732 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 LMOD1P29536 600 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-203ENST00000414670 KIF5BP33176 963 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 EPS15P42566 896 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 SSRP1Q08945 709 aaKnown RBP7.21□□□□□ -1.26
ITGB1-203ENST00000414670 DPY19L2Q6NUT2 758 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 TRIM22Q8IYM9 498 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 PDCL2Q8N4E4 241 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 PIBF1Q8WXW3 757 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 PHKBQ93100 1093 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 MAP3K14Q99558 947 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.21□□□□□ -1.26
ITGB1-203ENST00000414670 PGAP2Q9UHJ9 254 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 HACL1Q9UJ83 578 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 ZNF646O15015 1829 aaPredicted RBP7.21□□□□□ -1.26
ITGB1-203ENST00000414670 STK36Q9NRP7 1315 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 MYH2Q9UKX2 1941 aa7.21□□□□□ -1.26
ITGB1-203ENST00000414670 PLEKHA8P1O95397 391 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 GNAQP50148 359 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 FOSBP53539 338 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 AKAP17AQ02040 695 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 MAP3K10Q02779 954 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 GRM4Q14833 912 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ABCB5Q2M3G0 1257 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ANGEL2Q5VTE6 544 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 TMEM179Q6ZVK1 233 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 TMTC3Q6ZXV5 915 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CDC37L1Q7L3B6 337 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 MIGA2Q7L4E1 593 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CLEC10AQ8IUN9 316 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 APOBEC3FQ8IUX4 373 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CDAN1Q8IWY9 1227 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CMTR1Q8N1G2 835 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CCDC82Q8N4S0 544 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 TRPM4Q8TD43 1214 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 WASF1Q92558 559 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 SYAP1Q96A49 352 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 C8orf76Q96K31 380 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 TEPSINQ96N21 525 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ALG1Q9BT22 464 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 SLC26A6Q9BXS9 759 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 RNF26Q9BY78 433 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 DEFB129Q9H1M3 183 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 KANSL2Q9H9L4 492 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CABP5Q9NP86 173 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ADARB2Q9NS39 739 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 NYAP2Q9P242 653 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 CLIP2Q9UDT6 1046 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ATP6V1DQ9Y5K8 247 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 DDX60LQ5H9U9 1706 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ASTN2O75129 1339 aaPredicted RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ZC3H4Q9UPT8 1303 aaKnown RBP7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ADAMTSL1Q8N6G6 1762 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 ARFGEF1Q9Y6D6 1849 aa7.2□□□□□ -1.26
ITGB1-203ENST00000414670 NAV1Q8NEY1 1877 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 PALM3A6NDB9 673 aaPredicted RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 PRPF3O43395 683 aaKnown RBP7.19□□□□□ -1.26
ITGB1-203ENST00000414670 GDF11O95390 407 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 DEXIO95424 95 aa7.19□□□□□ -1.26
ITGB1-203ENST00000414670 GH2P01242 217 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms