RNA–Protein interactions for RNA: ENST00000414099.6

SCN5A-204, Transcript of sodium voltage-gated channel alpha subunit 5, human

TSL 1 (best) BASIC

Gene SCN5A, Length 8,303 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCN5A-204	ENST00000414099	SECISBP2L	Q93073	1101 aa	Known RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099	BLM	P54132	1417 aa	Predicted RBP	11.75	□□□□□ -0.53
SCN5A-204	ENST00000414099		A0A1W2PP64	1363 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	RNF168	Q8IYW5	571 aa	Predicted RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZRANB1	Q9UGI0	708 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	CHMP2A	O43633	222 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	FAM98C	Q17RN3	349 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	CFAP221	Q4G0U5	840 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	TNNI3K	Q59H18	835 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	GALNT17	Q6IS24	598 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	PHLDB3	Q6NSJ2	640 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	EYA1	Q99502	592 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	FPGT-TNNI3K	V9GXZ4	949 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	HSPA8	P11142	646 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	POLR2B	P30876	1174 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	YARS	P54577	528 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZBTB17	Q13105	803 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	REXO1	Q8N1G1	1221 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	SDCCAG3	Q96C92	435 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	XAGE2	Q96GT9	111 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	WDR17	Q8IZU2	1322 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	NDUFAB1	O14561	156 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	KARS	Q15046	597 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	TMTC1	Q8IUR5	882 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	TCOF1	Q13428	1488 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	NEO1	Q92859	1461 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	GCNT3	O95395	438 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	CWF19L2	Q2TBE0	894 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCDC84	Q86UT8	332 aa	Predicted RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	FAM89A	Q96GI7	184 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	PA2G4	Q9UQ80	394 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	XPOT	O43592	962 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	DNM1	Q05193	864 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	MYCT1	Q8N699	235 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	TYW1	Q9NV66	732 aa	Known RBP	11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	ATP10D	Q9P241	1426 aa		11.74	□□□□□ -0.53
SCN5A-204	ENST00000414099	VSIG1	Q86XK7	387 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	CLNS1A	P54105	237 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	FAM160A1	Q05DH4	1040 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	TBC1D8B	Q0IIM8	1120 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	NONO	Q15233	471 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZC3H15	Q8WU90	426 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	PRKAG2	Q9UGJ0	569 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	RNF40	O75150	1001 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	OAT	P04181	439 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	RPS6KA2	Q15349	733 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	SYT10	Q6XYQ8	523 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	SPATA5	Q8NB90	893 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	SEPT10	Q9P0V9	454 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	GPAA1	O43292	621 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	GAS7	O60861	476 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	LUC7L3	O95232	432 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	INPP1	P49441	399 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	EVC	P57679	992 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	TRIML1	Q8N9V2	468 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZFP91	Q96JP5	570 aa	Predicted RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	TSPYL2	Q9H2G4	693 aa	Predicted RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	SLAIN2	Q9P270	581 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	GINS2	Q9Y248	185 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	AK2	P54819	239 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	KRBA2	Q6ZNG9	492 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	JPH2	Q9BR39	696 aa	Predicted RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	TRIM56	Q9BRZ2	755 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	EIF3CL	B5ME19	914 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	PPFIA3	O75145	1194 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	PAK1	Q13153	545 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	IGSF22	Q8N9C0	903 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	MLKL	Q8NB16	471 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	EIF3C	Q99613	913 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	GCKR	Q14397	625 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	NCAPH2	Q6IBW4	605 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	ATP8A2	Q9NTI2	1148 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	PKD2L1	Q9P0L9	805 aa		11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099	LARS	Q9P2J5	1176 aa	Known RBP	11.73	□□□□□ -0.53
SCN5A-204	ENST00000414099		A0A1B0GVL5	298 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	ANKRD20A3	Q5VUR7	823 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	FAM160B1	Q5W0V3	765 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	GLG1	Q92896	1179 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	ANKFY1	Q9P2R3	1169 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	PCDHB13	Q9Y5F0	798 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCDC184	Q52MB2	194 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	TTLL7	Q6ZT98	887 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	ASIC3	Q9UHC3	531 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	PARD3	Q8TEW0	1356 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	ZNF174	Q15697	407 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	TTC38	Q5R3I4	469 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	DEPTOR	Q8TB45	409 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	GBP5	Q96PP8	586 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	MLXIP	Q9HAP2	919 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	BAG5	Q9UL15	447 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	MAP3K19	Q56UN5	1328 aa		11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	HOXA7	P31268	230 aa	Predicted RBP	11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	HPD	P32754	393 aa	Predicted RBP	11.72	□□□□□ -0.53
SCN5A-204	ENST00000414099	TNNC2	P02585	160 aa		11.71	□□□□□ -0.53
SCN5A-204	ENST00000414099	GARS	P41250	739 aa	Known RBP	11.71	□□□□□ -0.53
SCN5A-204	ENST00000414099	BBOF1	Q8ND07	529 aa		11.71	□□□□□ -0.53
SCN5A-204	ENST00000414099	CCDC51	Q96ER9	411 aa		11.71	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms