RNA–Protein interactions for RNA: ENST00000414040.6

TNFRSF25-206, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 1,198 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-206ENST00000414040 TANGO6Q9C0B7 1094 aa27.27■■□□□ 1.96
TNFRSF25-206ENST00000414040 XRN2Q9H0D6 950 aaKnown RBP eCLIP27.27■■□□□ 1.96
TNFRSF25-206ENST00000414040 ERC2O15083 957 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 ZFYP08048 801 aaPredicted RBP27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 CCL14Q16627 93 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 SBK1Q52WX2 424 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 MORN1Q5T089 497 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 PLEKHH3Q7Z736 793 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 CCDC17Q96LX7 622 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 TMX2Q9Y320 296 aa27.26■■□□□ 1.95
TNFRSF25-206ENST00000414040 ROBO3Q96MS0 1386 aa27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 MINDY4BA8MYZ0 360 aa27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 EEF2P13639 858 aaKnown RBP27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 HDAC1Q13547 482 aaPredicted RBP27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 SOCS4Q8WXH5 440 aa27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 FSD1Q9BTV5 496 aa27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 ARHGEF10LQ9HCE6 1279 aa27.25■■□□□ 1.95
TNFRSF25-206ENST00000414040 FARP2O94887 1054 aaPredicted RBP27.24■■□□□ 1.95
TNFRSF25-206ENST00000414040 RASA1P20936 1047 aa27.24■■□□□ 1.95
TNFRSF25-206ENST00000414040 CCAR1Q8IX12 1150 aaKnown RBP27.24■■□□□ 1.95
TNFRSF25-206ENST00000414040 VCPKMTQ9H867 229 aa27.24■■□□□ 1.95
TNFRSF25-206ENST00000414040 ZNF236Q9UL36 1845 aa27.23■■□□□ 1.95
TNFRSF25-206ENST00000414040 ATP2B2Q01814 1243 aa27.23■■□□□ 1.95
TNFRSF25-206ENST00000414040 WDR78Q5VTH9 848 aa27.23■■□□□ 1.95
TNFRSF25-206ENST00000414040 CRISPLD2Q9H0B8 497 aa27.23■■□□□ 1.95
TNFRSF25-206ENST00000414040 CEP290O15078 2479 aa27.23■■□□□ 1.95
TNFRSF25-206ENST00000414040 ZNFX1Q9P2E3 1918 aaKnown RBP27.22■■□□□ 1.95
TNFRSF25-206ENST00000414040 TFRCP02786 760 aaKnown RBP27.22■■□□□ 1.95
TNFRSF25-206ENST00000414040 COG2Q14746 738 aa27.22■■□□□ 1.95
TNFRSF25-206ENST00000414040 ZMYM1Q5SVZ6 1142 aa27.22■■□□□ 1.95
TNFRSF25-206ENST00000414040 GIMAP6Q6P9H5 292 aa27.22■■□□□ 1.95
TNFRSF25-206ENST00000414040 SLC34A2O95436 690 aa27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 XRCC5P13010 732 aaKnown RBP27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 PRKAR2AP13861 404 aaKnown RBP27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 TDO2P48775 406 aa27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 MAP3K21Q5TCX8 1036 aa27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 CCDC129Q6ZRS4 1044 aa27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 DIS3LQ8TF46 1054 aaKnown RBP27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 ATG4CQ96DT6 458 aa27.21■■□□□ 1.95
TNFRSF25-206ENST00000414040 RPTORQ8N122 1335 aa27.2■■□□□ 1.95
TNFRSF25-206ENST00000414040 PRDM1O75626 825 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 APPP05067 770 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 ZKSCAN1P17029 563 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 RGS2P41220 211 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 CCNA1P78396 465 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 MAP2K5Q13163 448 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 SAMD1Q6SPF0 538 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 IFNL3Q8IZI9 196 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 LPAR1Q92633 364 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 GCC1Q96CN9 775 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 APBA2Q99767 749 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 MOV10L1Q9BXT6 1211 aaKnown RBP27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 KANSL2Q9H9L4 492 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 CWC22Q9HCG8 908 aaKnown RBP27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 HMX1Q9NP08 348 aaPredicted RBP27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 FLRT1Q9NZU1 646 aa27.2■■□□□ 1.94
TNFRSF25-206ENST00000414040 H0YGN5 161 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 FOXP2O15409 715 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 FLOT1O75955 427 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 GNAT2P19087 354 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 PTPREP23469 700 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 DSG3P32926 999 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 CACNB2Q08289 660 aaPredicted RBP27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 EXOC6Q8TAG9 804 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 SH2D4AQ9H788 454 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 FBXO28Q9NVF7 368 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 STAP2Q9UGK3 403 aa27.19■■□□□ 1.94
TNFRSF25-206ENST00000414040 PATL2C9JE40 543 aaKnown RBP27.18■■□□□ 1.94
TNFRSF25-206ENST00000414040 PDE1AP54750 535 aa27.18■■□□□ 1.94
TNFRSF25-206ENST00000414040 HOXC10Q9NYD6 342 aa27.18■■□□□ 1.94
TNFRSF25-206ENST00000414040 WDR46O15213 610 aaKnown RBP27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 CCND3P30281 292 aaPredicted RBP27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 GRB14Q14449 540 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 NPLOC4Q8TAT6 608 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 DPF3Q92784 378 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 LNPKQ9C0E8 428 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 SPATC1LQ9H0A9 340 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 MKNK2Q9HBH9 465 aa27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 ZBTB47Q9UFB7 747 aaPredicted RBP27.17■■□□□ 1.94
TNFRSF25-206ENST00000414040 SLC15A5A6NIM6 579 aa27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 RAD21O60216 631 aa27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 IGHDP01880 384 aa27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 MNX1P50219 401 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 LRRFIP1Q32MZ4 808 aaKnown RBP27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 PAWRQ96IZ0 340 aaKnown RBP27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 NUP88Q99567 741 aaPredicted RBP27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 PLXNA1Q9UIW2 1896 aa27.16■■□□□ 1.94
TNFRSF25-206ENST00000414040 IGKV6D-41A0A0C4DH26 115 aa27.15■■□□□ 1.94
TNFRSF25-206ENST00000414040 FAM83BQ5T0W9 1011 aa27.15■■□□□ 1.94
TNFRSF25-206ENST00000414040 ERCC3P19447 782 aa27.14■■□□□ 1.94
TNFRSF25-206ENST00000414040 PLS1Q14651 629 aa27.14■■□□□ 1.94
TNFRSF25-206ENST00000414040 VPS53Q5VIR6 699 aa27.14■■□□□ 1.94
TNFRSF25-206ENST00000414040 B4GALNT3Q6L9W6 998 aa27.14■■□□□ 1.94
TNFRSF25-206ENST00000414040 IVNS1ABPQ9Y6Y0 642 aa27.14■■□□□ 1.94
TNFRSF25-206ENST00000414040 TMEM132BQ14DG7 1078 aa27.13■■□□□ 1.93
TNFRSF25-206ENST00000414040 SMC5Q8IY18 1101 aa27.13■■□□□ 1.93
TNFRSF25-206ENST00000414040 TRMT44Q8IYL2 757 aaKnown RBP27.13■■□□□ 1.93
TNFRSF25-206ENST00000414040 GOPCQ9HD26 462 aa27.13■■□□□ 1.93
TNFRSF25-206ENST00000414040 HABP4Q5JVS0 413 aaKnown RBP27.12■■□□□ 1.93
TNFRSF25-206ENST00000414040 EVI5LQ96CN4 794 aa27.12■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms