RNA–Protein interactions for RNA: ENST00000412218.1

LINC01643-201, Transcript of long intergenic non-protein coding RNA 1643, humanhuman

TSL 5 BASIC

Gene LINC01643, Length 757 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01643-201ENST00000412218 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 GPR142Q7Z601 462 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 UBE2Q1Q7Z7E8 422 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 GCC1Q96CN9 775 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 NUDT12Q9BQG2 462 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 SH2D4AQ9H788 454 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 ARHGEF10LQ9HCE6 1279 aa12.16□□□□□ -0.46
LINC01643-201ENST00000412218 EPB41L4AQ9HCS5 686 aaPredicted RBP12.16□□□□□ -0.46
LINC01643-201ENST00000412218 A0A0G2JMZ2 1700 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 SGPL1O95470 568 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 XRCC5P13010 732 aaKnown RBP12.15□□□□□ -0.46
LINC01643-201ENST00000412218 GNAT2P19087 354 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 CYP2B6P20813 491 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 CCNA1P78396 465 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 TRIM32Q13049 653 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 MORN1Q5T089 497 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 ANKRD45Q5TZF3 282 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 PPP4R3CPQ6ZMV5 832 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 PLEKHH3Q7Z736 793 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 TRIB2Q92519 343 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 LPAR1Q92633 364 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 USP6NLQ92738 828 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 FSD1Q9BTV5 496 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 TANGO6Q9C0B7 1094 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC01643-201ENST00000412218 VCPKMTQ9H867 229 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 BTBD7Q9P203 1132 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 TMX2Q9Y320 296 aa12.15□□□□□ -0.46
LINC01643-201ENST00000412218 BAZ2AQ9UIF9 1905 aaKnown RBP12.15□□□□□ -0.46
LINC01643-201ENST00000412218 RGS2P41220 211 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 COG2Q14746 738 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 ZMYM1Q5SVZ6 1142 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 MAP3K21Q5TCX8 1036 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 CCAR1Q8IX12 1150 aaKnown RBP12.14□□□□□ -0.47
LINC01643-201ENST00000412218 DEFB118Q96PH6 123 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 SEC62Q99442 399 aaKnown RBP12.14□□□□□ -0.47
LINC01643-201ENST00000412218 APBA2Q99767 749 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
LINC01643-201ENST00000412218 CRISPLD2Q9H0B8 497 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 KANSL2Q9H9L4 492 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
LINC01643-201ENST00000412218 STAP2Q9UGK3 403 aa12.14□□□□□ -0.47
LINC01643-201ENST00000412218 MKI67P46013 3256 aaKnown RBP12.14□□□□□ -0.47
LINC01643-201ENST00000412218 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 WDR46O15213 610 aaKnown RBP12.13□□□□□ -0.47
LINC01643-201ENST00000412218 FARP2O94887 1054 aaPredicted RBP12.13□□□□□ -0.47
LINC01643-201ENST00000412218 EEF2P13639 858 aaKnown RBP12.13□□□□□ -0.47
LINC01643-201ENST00000412218 CAPN2P17655 700 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 RASA1P20936 1047 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 TDO2P48775 406 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 TRMT44Q8IYL2 757 aaKnown RBP12.13□□□□□ -0.47
LINC01643-201ENST00000412218 SPICE1Q8N0Z3 855 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 HOXC10Q9NYD6 342 aa12.13□□□□□ -0.47
LINC01643-201ENST00000412218 GREB1LQ9C091 1923 aaPredicted RBP12.13□□□□□ -0.47
LINC01643-201ENST00000412218 RPTORQ8N122 1335 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 PATL2C9JE40 543 aaKnown RBP12.12□□□□□ -0.47
LINC01643-201ENST00000412218 APPP05067 770 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 ZKSCAN1P17029 563 aaPredicted RBP12.12□□□□□ -0.47
LINC01643-201ENST00000412218 PDE1AP54750 535 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 MAP2K5Q13163 448 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 GRB14Q14449 540 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 SMC5Q8IY18 1101 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 IFNL3Q8IZI9 196 aa12.12□□□□□ -0.47
LINC01643-201ENST00000412218 CWC22Q9HCG8 908 aaKnown RBP12.12□□□□□ -0.47
LINC01643-201ENST00000412218 HMX1Q9NP08 348 aaPredicted RBP12.12□□□□□ -0.47
LINC01643-201ENST00000412218 MYH8P13535 1937 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 IGKV6D-41A0A0C4DH26 115 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 SLC15A5A6NIM6 579 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 FOXP2O15409 715 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 FLOT1O75955 427 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 SLC34A2O95436 690 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 TFRCP02786 760 aaKnown RBP12.11□□□□□ -0.47
LINC01643-201ENST00000412218 PRKAR2AP13861 404 aaKnown RBP12.11□□□□□ -0.47
LINC01643-201ENST00000412218 PTPREP23469 700 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 DSG3P32926 999 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 CCL14Q16627 93 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 WDR78Q5VTH9 848 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 STK11IPQ8N1F8 1099 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 MB21D1Q8N884 522 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 EVI5LQ96CN4 794 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 ATG4CQ96DT6 458 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 MOV10L1Q9BXT6 1211 aaKnown RBP12.11□□□□□ -0.47
LINC01643-201ENST00000412218 NACAP1Q9BZK3 213 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 SPATC1LQ9H0A9 340 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 GOPCQ9HD26 462 aa12.11□□□□□ -0.47
LINC01643-201ENST00000412218 RLFQ13129 1914 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 PLIN4Q96Q06 1357 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 ZNF236Q9UL36 1845 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 PRDM1O75626 825 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 HOXC6P09630 235 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 CACNB2Q08289 660 aaPredicted RBP12.1□□□□□ -0.47
LINC01643-201ENST00000412218 C8orf34Q49A92 452 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 SKAP1Q86WV1 359 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 SHCBP1Q8NEM2 672 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 HTATIP2Q9BUP3 242 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 LNPKQ9C0E8 428 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 NAPBQ9H115 298 aa12.1□□□□□ -0.47
LINC01643-201ENST00000412218 ZNF287Q9HBT7 754 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms