RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 USP17L10C9JJH3 530 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 GNAQP50148 359 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 ATP2B2Q01814 1243 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 PPIL2Q13356 520 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 COL9A3Q14050 684 aaPredicted RBP21.8■■□□□ 1.08
CDC42-204ENST00000411827 SIAH1Q8IUQ4 282 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 FEZ1Q99689 392 aa21.8■■□□□ 1.08
CDC42-204ENST00000411827 TROAPQ12815 778 aa21.79■■□□□ 1.08
CDC42-204ENST00000411827 GPATCH4Q5T3I0 446 aaKnown RBP21.79■■□□□ 1.08
CDC42-204ENST00000411827 CTCFLQ8NI51 663 aaPredicted RBP21.79■■□□□ 1.08
CDC42-204ENST00000411827 DCAF4Q8WV16 495 aa21.79■■□□□ 1.08
CDC42-204ENST00000411827 GMCL1Q96IK5 515 aa21.79■■□□□ 1.08
CDC42-204ENST00000411827 LZTS2Q9BRK4 669 aa21.79■■□□□ 1.08
CDC42-204ENST00000411827 RBM28Q9NW13 759 aaKnown RBP21.79■■□□□ 1.08
CDC42-204ENST00000411827 RBM19Q9Y4C8 960 aaKnown RBP21.79■■□□□ 1.08
CDC42-204ENST00000411827 AFG3L2Q9Y4W6 797 aa21.79■■□□□ 1.08
CDC42-204ENST00000411827 NID2Q14112 1375 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 K7ELQ4 463 aaPredicted RBP21.78■■□□□ 1.08
CDC42-204ENST00000411827 PDIA3P30101 505 aaKnown RBP21.78■■□□□ 1.08
CDC42-204ENST00000411827 BACE1P56817 501 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 HUNKP57058 714 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 APOBRQ0VD83 1088 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 ASPRV1Q53RT3 343 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 CPLX2Q6PUV4 134 aaKnown RBP21.78■■□□□ 1.08
CDC42-204ENST00000411827 USP17L2Q6R6M4 530 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 SLKQ9H2G2 1235 aaPredicted RBP21.78■■□□□ 1.08
CDC42-204ENST00000411827 VCPKMTQ9H867 229 aa21.78■■□□□ 1.08
CDC42-204ENST00000411827 GOLGA8BA8MQT2 603 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 F5H6K3 240 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 PFKFB2O60825 505 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 ZBTB48P10074 688 aaPredicted RBP21.77■■□□□ 1.08
CDC42-204ENST00000411827 FMR1Q06787 632 aaKnown RBP eCLIP21.77■■□□□ 1.08
CDC42-204ENST00000411827 KLRC3Q07444 240 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 SPP2Q13103 211 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 SH3D19Q5HYK7 790 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 SAPCD2Q86UD0 394 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 FANCBQ8NB91 859 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 ELP3Q9H9T3 547 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 GPHNQ9NQX3 736 aaPredicted RBP21.77■■□□□ 1.08
CDC42-204ENST00000411827 BRPF3Q9ULD4 1205 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 TPCN1Q9ULQ1 816 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 FZD1Q9UP38 647 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 KCNH4Q9UQ05 1017 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 ATAD5Q96QE3 1844 aa21.77■■□□□ 1.08
CDC42-204ENST00000411827 PCNTO95613 3336 aa21.77■■□□□ 1.07
CDC42-204ENST00000411827 SNHG28P0DPA3 235 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 SMARCA1P28370 1054 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 METAP2P50579 478 aaKnown RBP eCLIP21.76■■□□□ 1.07
CDC42-204ENST00000411827 SHROOM1Q2M3G4 852 aaPredicted RBP21.76■■□□□ 1.07
CDC42-204ENST00000411827 MOB2Q70IA6 237 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 CCDC102AQ96A19 550 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 C12orf42Q96LP6 360 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 TMOD4Q9NZQ9 345 aa21.76■■□□□ 1.07
CDC42-204ENST00000411827 NAP1L2Q9ULW6 460 aaPredicted RBP21.76■■□□□ 1.07
CDC42-204ENST00000411827 A0A1W2PRG0 241 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 CDKL5O76039 1030 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 PARP1P09874 1014 aaKnown RBP21.75■■□□□ 1.07
CDC42-204ENST00000411827 RTN1Q16799 776 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 SLFN13Q68D06 897 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 FASTKD5Q7L8L6 764 aaKnown RBP21.75■■□□□ 1.07
CDC42-204ENST00000411827 ACER1Q8TDN7 264 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 OPTNQ96CV9 577 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 TMX3Q96JJ7 454 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 CLMNQ96JQ2 1002 aa21.75■■□□□ 1.07
CDC42-204ENST00000411827 GOLGA8AA7E2F4 631 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 WDR46O15213 610 aaKnown RBP21.74■■□□□ 1.07
CDC42-204ENST00000411827 PLA2G6O60733 806 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 PDHBP11177 359 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 SLC1A4P43007 532 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 APLP1P51693 650 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 SNAPC2Q13487 334 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 GRM4Q14833 912 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 MICU3Q86XE3 530 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 CLEC10AQ8IUN9 316 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 LRRC47Q8N1G4 583 aaKnown RBP21.74■■□□□ 1.07
CDC42-204ENST00000411827 PROCA1Q8NCQ7 364 aaPredicted RBP21.74■■□□□ 1.07
CDC42-204ENST00000411827 NUP133Q8WUM0 1156 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 OTUD5Q96G74 571 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 LLPHQ9BRT6 129 aaKnown RBP21.74■■□□□ 1.07
CDC42-204ENST00000411827 SENP2Q9HC62 589 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 CREBZFQ9NS37 354 aa21.74■■□□□ 1.07
CDC42-204ENST00000411827 TRIM75PA6NK02 468 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 CPLX1O14810 134 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 NDUFB10O96000 172 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 ECE1P42892 770 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 GTF2A2P52657 109 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 MTMR2Q13614 643 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 ME3Q16798 604 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 RGMBQ6NW40 437 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 DNAJC5GQ8N7S2 189 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 GTF3C6Q969F1 213 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 INTS4Q96HW7 963 aaKnown RBP21.73■■□□□ 1.07
CDC42-204ENST00000411827 RBM27Q9P2N5 1060 aaKnown RBP21.73■■□□□ 1.07
CDC42-204ENST00000411827 DAXXQ9UER7 740 aaPredicted RBP21.73■■□□□ 1.07
CDC42-204ENST00000411827 HPS5Q9UPZ3 1129 aa21.73■■□□□ 1.07
CDC42-204ENST00000411827 OTOFQ9HC10 1997 aa21.72■■□□□ 1.07
CDC42-204ENST00000411827 PALM3A6NDB9 673 aaPredicted RBP21.72■■□□□ 1.07
CDC42-204ENST00000411827 CD2BP2O95400 341 aaKnown RBP21.72■■□□□ 1.07
CDC42-204ENST00000411827 BMP3P12645 472 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms