RNA–Protein interactions for RNA: ENST00000411819.1

MSH6-202, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 548 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-202ENST00000411819 CCL14Q16627 93 aa26.79■■□□□ 1.88
MSH6-202ENST00000411819 CTR9Q6PD62 1173 aa26.79■■□□□ 1.88
MSH6-202ENST00000411819 USP6NLQ92738 828 aa26.79■■□□□ 1.88
MSH6-202ENST00000411819 PAWRQ96IZ0 340 aaKnown RBP26.79■■□□□ 1.88
MSH6-202ENST00000411819 IVNS1ABPQ9Y6Y0 642 aa26.79■■□□□ 1.88
MSH6-202ENST00000411819 A0A0G2JMZ2 1700 aa26.79■■□□□ 1.88
MSH6-202ENST00000411819 ATP2B2Q01814 1243 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 MAP2K5Q13163 448 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 COG2Q14746 738 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 SPICE1Q8N0Z3 855 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 DIS3LQ8TF46 1054 aaKnown RBP26.78■■□□□ 1.88
MSH6-202ENST00000411819 APPBP2Q92624 585 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 STRBPQ96SI9 672 aaKnown RBP26.78■■□□□ 1.88
MSH6-202ENST00000411819 NR2E3Q9Y5X4 410 aa26.78■■□□□ 1.88
MSH6-202ENST00000411819 KIAA1755Q5JYT7 1200 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 MAP3K21Q5TCX8 1036 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 SAMD1Q6SPF0 538 aaPredicted RBP26.77■■□□□ 1.88
MSH6-202ENST00000411819 CHRDL2Q6WN34 429 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 NECAB2Q7Z6G3 386 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 LPAR1Q92633 364 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 TMX2Q9Y320 296 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 RLFQ13129 1914 aa26.77■■□□□ 1.88
MSH6-202ENST00000411819 RNF113AO15541 343 aaKnown RBP26.76■■□□□ 1.87
MSH6-202ENST00000411819 EVI5O60447 810 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 CACNB2Q08289 660 aaPredicted RBP26.76■■□□□ 1.87
MSH6-202ENST00000411819 STK11IPQ8N1F8 1099 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 ANKLE1Q8NAG6 615 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 OSBP2Q969R2 916 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 VCPKMTQ9H867 229 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 HOXC10Q9NYD6 342 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 ALPK3Q96L96 1907 aa26.76■■□□□ 1.87
MSH6-202ENST00000411819 TTC41PQ6P2S7 1318 aa26.75■■□□□ 1.87
MSH6-202ENST00000411819 SLC15A5A6NIM6 579 aa26.75■■□□□ 1.87
MSH6-202ENST00000411819 ERC2O15083 957 aa26.75■■□□□ 1.87
MSH6-202ENST00000411819 FLOT1O75955 427 aa26.75■■□□□ 1.87
MSH6-202ENST00000411819 ZFYP08048 801 aaPredicted RBP26.75■■□□□ 1.87
MSH6-202ENST00000411819 PTPREP23469 700 aa26.75■■□□□ 1.87
MSH6-202ENST00000411819 PARP14Q460N5 1801 aa26.74■■□□□ 1.87
MSH6-202ENST00000411819 GPAA1O43292 621 aa26.74■■□□□ 1.87
MSH6-202ENST00000411819 LRRFIP1Q32MZ4 808 aaKnown RBP26.74■■□□□ 1.87
MSH6-202ENST00000411819 SIAH1Q8IUQ4 282 aa26.74■■□□□ 1.87
MSH6-202ENST00000411819 GSG1L2A8MUP6 293 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 MINDY4BA8MYZ0 360 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 RAD21O60216 631 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 EEF2P13639 858 aaKnown RBP26.73■■□□□ 1.87
MSH6-202ENST00000411819 CCND3P30281 292 aaPredicted RBP26.73■■□□□ 1.87
MSH6-202ENST00000411819 GRB14Q14449 540 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 PLS1Q14651 629 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 OTUD7AQ8TE49 926 aaPredicted RBP26.73■■□□□ 1.87
MSH6-202ENST00000411819 MOV10L1Q9BXT6 1211 aaKnown RBP26.73■■□□□ 1.87
MSH6-202ENST00000411819 KANSL2Q9H9L4 492 aa26.73■■□□□ 1.87
MSH6-202ENST00000411819 M0R2C6 588 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 WDR46O15213 610 aaKnown RBP26.72■■□□□ 1.87
MSH6-202ENST00000411819 DSG3P32926 999 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 TDO2P48775 406 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 SBK1Q52WX2 424 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 MFSD14CQ5VZR4 134 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 MB21D1Q8N884 522 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 ATG4CQ96DT6 458 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 YTHDC1Q96MU7 727 aaKnown RBP26.72■■□□□ 1.87
MSH6-202ENST00000411819 CRBNQ96SW2 442 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 NBPF3Q9H094 633 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 SPATC1LQ9H0A9 340 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 MKNK2Q9HBH9 465 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 ZBTB47Q9UFB7 747 aaPredicted RBP26.72■■□□□ 1.87
MSH6-202ENST00000411819 OGDHLQ9ULD0 1010 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 GREB1LQ9C091 1923 aaPredicted RBP26.72■■□□□ 1.87
MSH6-202ENST00000411819 FRMPD3Q5JV73 1810 aa26.72■■□□□ 1.87
MSH6-202ENST00000411819 APPP05067 770 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 GNAT2P19087 354 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 GIMAP6Q6P9H5 292 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 PI4K2BQ8TCG2 481 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 FSD1Q9BTV5 496 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 EPB41L4AQ9HCS5 686 aaPredicted RBP26.71■■□□□ 1.87
MSH6-202ENST00000411819 GOPCQ9HD26 462 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 FLRT1Q9NZU1 646 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 ZNF236Q9UL36 1845 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 TRIOBPQ9H2D6 2365 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 ROBO3Q96MS0 1386 aa26.71■■□□□ 1.87
MSH6-202ENST00000411819 COL11A1P12107 1806 aaPredicted RBP26.7■■□□□ 1.87
MSH6-202ENST00000411819 MX1P20591 662 aa26.7■■□□□ 1.86
MSH6-202ENST00000411819 C11orf49Q9H6J7 331 aa26.7■■□□□ 1.86
MSH6-202ENST00000411819 ERCC3P19447 782 aa26.69■■□□□ 1.86
MSH6-202ENST00000411819 FXR1P51114 621 aaKnown RBP eCLIP26.69■■□□□ 1.86
MSH6-202ENST00000411819 DPP9Q86TI2 863 aa26.69■■□□□ 1.86
MSH6-202ENST00000411819 NCAPG2Q86XI2 1143 aa26.69■■□□□ 1.86
MSH6-202ENST00000411819 NPLOC4Q8TAT6 608 aa26.69■■□□□ 1.86
MSH6-202ENST00000411819 RASA1P20936 1047 aa26.68■■□□□ 1.86
MSH6-202ENST00000411819 ADORA2AP29274 412 aa26.68■■□□□ 1.86
MSH6-202ENST00000411819 SHCBP1Q8NEM2 672 aa26.68■■□□□ 1.86
MSH6-202ENST00000411819 HOXC6P09630 235 aa26.67■■□□□ 1.86
MSH6-202ENST00000411819 MNX1P50219 401 aaPredicted RBP26.67■■□□□ 1.86
MSH6-202ENST00000411819 C7orf61Q8IZ16 206 aa26.67■■□□□ 1.86
MSH6-202ENST00000411819 RBM27Q9P2N5 1060 aaKnown RBP26.67■■□□□ 1.86
MSH6-202ENST00000411819 CNGA1P29973 690 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 CYP2C19P33261 490 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 FAM83BQ5T0W9 1011 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 ANKRD45Q5TZF3 282 aa26.66■■□□□ 1.86
MSH6-202ENST00000411819 SEC62Q99442 399 aaKnown RBP26.66■■□□□ 1.86
MSH6-202ENST00000411819 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms