RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 VMACQ2NL98 169 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 TSNAXIP1Q2TAA8 658 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMPRSS7Q7RTY8 843 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 FAM13CQ8NE31 585 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 PIWIL2Q8TC59 973 aaKnown RBP3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 VWCEQ96DN2 955 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 GPR62Q9BZJ7 368 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 MIR1-1HGQ9H1L0 117 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 EPB41L4AQ9HCS5 686 aaPredicted RBP3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 PARP2Q9UGN5 583 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 ZNF281Q9Y2X9 895 aa3.07□□□□□ -1.92
RNU2-55P-201ENST00000411146 ANKRD33BA6NCL7 494 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 TCAF2A6NFQ2 919 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 CILPO75339 1184 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 KRTAP10-2P60368 255 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 FAM160A1Q05DH4 1040 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 CAMK2GQ13555 558 aaPredicted RBP3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 CIAPIN1Q6FI81 312 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 USHBP1Q8N6Y0 703 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 LINC01599Q8WXQ3 324 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 KREMEN1Q96MU8 473 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 KIF2CQ99661 725 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 ZNF552Q9H707 407 aaPredicted RBP3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 REV1Q9UBZ9 1251 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 KLHL3Q9UH77 587 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 TIMELESSQ9UNS1 1208 aa3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 YBX2Q9Y2T7 364 aaKnown RBP3.06□□□□□ -1.92
RNU2-55P-201ENST00000411146 MINDY4BA8MYZ0 360 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 TLR3O15455 904 aaKnown RBP3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 TRIM13O60858 407 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 PRPF40AO75400 957 aaKnown RBP3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 RAC2P15153 192 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 GARTP22102 1010 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 LTKP29376 864 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 ETV3P41162 512 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 CEBPAP49715 358 aaPredicted RBP3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 EPHB3P54753 998 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 CTSWP56202 376 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMEM201Q5SNT2 666 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMC3Q7Z5M5 1100 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 PDZD8Q8NEN9 1154 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 CYB5D2Q8WUJ1 264 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 INTS4Q96HW7 963 aaKnown RBP3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 PLCD4Q9BRC7 762 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 PARD6AQ9NPB6 346 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 COPRSQ9NQ92 184 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 GPATCH2Q9NW75 528 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 ADAM30Q9UKF2 790 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 TACC3Q9Y6A5 838 aa3.05□□□□□ -1.92
RNU2-55P-201ENST00000411146 USP31Q70CQ4 1352 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 RBM47A0AV96 593 aaKnown RBP3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMEM82A0PJX8 343 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 USP2O75604 605 aaPredicted RBP3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 UBOX5O94941 541 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 HTR3BO95264 441 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 POLR2BP30876 1174 aaKnown RBP3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 PDE6BP35913 854 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 PDE4CQ08493 712 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 TAF1CQ15572 869 aaPredicted RBP3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMEM132EQ6IEE7 984 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 ZNF746Q6NUN9 644 aaPredicted RBP3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 SYT8Q8NBV8 401 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 CCDC120Q96HB5 630 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 KCNC2Q96PR1 638 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 SLC26A8Q96RN1 970 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 FOXP3Q9BZS1 431 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 GPR160Q9UJ42 338 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 JAG2Q9Y219 1238 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 KCTD3Q9Y597 815 aa3.04□□□□□ -1.92
RNU2-55P-201ENST00000411146 OTOL1A6NHN0 477 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 SLC22A31A6NKX4 558 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 FOXD2O60548 495 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 FKTNO75072 461 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 PI3P19957 117 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 LMNB1P20700 586 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 RPL10P27635 214 aaKnown RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 TNNI2P48788 182 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 DAB2P98082 770 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 PDE4BQ07343 736 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 NR0B2Q15466 257 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 EAPPQ56P03 285 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 NLRX1Q86UT6 975 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 SLFN12Q8IYM2 578 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 TMEFF1Q8IYR6 380 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 ZDHHC14Q8IZN3 488 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 MARCH10Q8NA82 808 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 RNF141Q8WVD5 230 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 GATAD2BQ8WXI9 593 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 RELTQ969Z4 430 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 HHIPL1Q96JK4 782 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 ZNF512BQ96KM6 892 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 RHOVQ96L33 236 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 FRMD6Q96NE9 622 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 TRIT1Q9H3H1 467 aaKnown RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 ANTXR1Q9H6X2 564 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 CNTD2Q9H8S5 307 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 MBD1Q9UIS9 605 aaPredicted RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 CNOT6Q9ULM6 557 aaKnown RBP3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 PLA2G2DQ9UNK4 145 aa3.03□□□□□ -1.92
RNU2-55P-201ENST00000411146 PRR36Q9H6K5 1346 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms