RNA–Protein interactions for RNA: ENST00000409881.1

MINDY4-202, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 2,488 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-202ENST00000409881 RPS6KB1P23443 525 aa16.49■□□□□ 0.23
MINDY4-202ENST00000409881 GABPAQ06546 454 aa16.49■□□□□ 0.23
MINDY4-202ENST00000409881 FAM173BQ6P4H8 233 aa16.49■□□□□ 0.23
MINDY4-202ENST00000409881 TEPSINQ96N21 525 aa16.49■□□□□ 0.23
MINDY4-202ENST00000409881 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.49■□□□□ 0.23
MINDY4-202ENST00000409881 V9GYY5 206 aaPredicted RBP16.49■□□□□ 0.23
MINDY4-202ENST00000409881 ADM5C9JUS6 153 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 FGRP09769 529 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 POTEIP0CG38 1075 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 POTEJP0CG39 1038 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 ZNF75DP51815 510 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 DHX32Q7L7V1 743 aaKnown RBP16.48■□□□□ 0.23
MINDY4-202ENST00000409881 KRT26Q7Z3Y9 468 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 FERMT3Q86UX7 667 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 FOXP4Q8IVH2 680 aaPredicted RBP16.48■□□□□ 0.23
MINDY4-202ENST00000409881 ZC3H15Q8WU90 426 aaKnown RBP16.48■□□□□ 0.23
MINDY4-202ENST00000409881 ESR2Q92731 530 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 LRRC2Q9BYS8 371 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 SWAP70Q9UH65 585 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 PGAP2Q9UHJ9 254 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 PAXBP1Q9Y5B6 917 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 SIPA1L1O43166 1804 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 VGLL3A8MV65 326 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 TERF2Q15554 542 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 FAM47AQ5JRC9 791 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 CYB5R4Q7L1T6 521 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 MIGA2Q7L4E1 593 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 CACTINQ8WUQ7 758 aaKnown RBP16.48■□□□□ 0.23
MINDY4-202ENST00000409881 PDRG1Q9NUG6 133 aa16.48■□□□□ 0.23
MINDY4-202ENST00000409881 NBPF12Q5TAG4 269 aaPredicted RBP16.47■□□□□ 0.23
MINDY4-202ENST00000409881 ZNF444Q8N0Y2 327 aaPredicted RBP16.47■□□□□ 0.23
MINDY4-202ENST00000409881 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.47■□□□□ 0.23
MINDY4-202ENST00000409881 ZSWIM5Q9P217 1185 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 PRC1O43663 620 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 RASA1P20936 1047 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 SHMT1P34896 483 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 ANTXR2P58335 489 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 DLK2Q6UY11 383 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 PLA2G4DQ86XP0 818 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 NECAB1Q8N987 351 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 PPP2R3BQ9Y5P8 575 aa16.47■□□□□ 0.23
MINDY4-202ENST00000409881 TSPY2A6NKD2 308 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 CCDC144BQ3MJ40 725 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 CEP135Q66GS9 1140 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 ZKSCAN3Q9BRR0 538 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 DACT1Q9NYF0 836 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 HERC5Q9UII4 1024 aaKnown RBP16.46■□□□□ 0.23
MINDY4-202ENST00000409881 POLR2AP24928 1970 aaKnown RBP16.46■□□□□ 0.23
MINDY4-202ENST00000409881 TFAP4Q01664 338 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 KMT5BQ4FZB7 885 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 KRT222Q8N1A0 295 aa16.46■□□□□ 0.23
MINDY4-202ENST00000409881 TSPY3P0CV98 308 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 TSPY8P0CW00 308 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
MINDY4-202ENST00000409881 ST3GAL1Q11201 340 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 METTL16Q86W50 562 aaKnown RBP16.45■□□□□ 0.22
MINDY4-202ENST00000409881 GLIS2Q9BZE0 524 aaPredicted RBP16.45■□□□□ 0.22
MINDY4-202ENST00000409881 CLIP2Q9UDT6 1046 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 KRT85P78386 507 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 MAP1SQ66K74 1059 aaPredicted RBP16.45■□□□□ 0.22
MINDY4-202ENST00000409881 Q6ZUG5 572 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 UBAC1Q9BSL1 405 aa16.45■□□□□ 0.22
MINDY4-202ENST00000409881 ERICH4A6NGS2 130 aa16.44■□□□□ 0.22
MINDY4-202ENST00000409881 USP27XA6NNY8 438 aa16.44■□□□□ 0.22
MINDY4-202ENST00000409881 AKR1B1P15121 316 aa16.44■□□□□ 0.22
MINDY4-202ENST00000409881 CDC37L1Q7L3B6 337 aa16.44■□□□□ 0.22
MINDY4-202ENST00000409881 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
MINDY4-202ENST00000409881 ZNF215Q9UL58 517 aaPredicted RBP16.44■□□□□ 0.22
MINDY4-202ENST00000409881 MPHOSPH10O00566 681 aaKnown RBP16.44■□□□□ 0.22
MINDY4-202ENST00000409881 CERKLQ49MI3 558 aaPredicted RBP16.44■□□□□ 0.22
MINDY4-202ENST00000409881 ZNF397Q8NF99 534 aaPredicted RBP16.44■□□□□ 0.22
MINDY4-202ENST00000409881 IFIT3O14879 490 aaKnown RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 TBC1D12O60347 775 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 NMT2O60551 498 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 GDF11O95390 407 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 IRX5P78411 483 aaPredicted RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 PDE4CQ08493 712 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 ARID5BQ14865 1188 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 ME3Q16798 604 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 LARP1BQ659C4 914 aaKnown RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 TATDN1Q6P1N9 297 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 HOOK2Q96ED9 719 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 DNAJC25Q9H1X3 360 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 GPBP1L1Q9HC44 474 aaPredicted RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 ST7Q9NRC1 585 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 MYH8P13535 1937 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 SART3Q15020 963 aaKnown RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 SUPT20HL1Q3ZLR7 823 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 TMEM67Q5HYA8 995 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 LDHDQ86WU2 507 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 TFIP11Q9UBB9 837 aaKnown RBP16.43■□□□□ 0.22
MINDY4-202ENST00000409881 TAOK2Q9UL54 1235 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 WDR19Q8NEZ3 1342 aa16.43■□□□□ 0.22
MINDY4-202ENST00000409881 ERICH2A1L162 156 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 CCDC66A2RUB6 948 aa16.42■□□□□ 0.22
MINDY4-202ENST00000409881 PRKG1Q13976 671 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms