RNA–Protein interactions for RNA: ENST00000409649.5

IMP4-202, Transcript of IMP4, U3 small nucleolar ribonucleoprotein, humanhuman

TSL 2

Gene IMP4, Length 822 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IMP4-202ENST00000409649 SHROOM1Q2M3G4 852 aaPredicted RBP19.5■□□□□ 0.71
IMP4-202ENST00000409649 DEFB115Q30KQ5 88 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 SH3D19Q5HYK7 790 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 SPRYD7Q5W111 196 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 FASTKD5Q7L8L6 764 aaKnown RBP19.5■□□□□ 0.71
IMP4-202ENST00000409649 SIAH1Q8IUQ4 282 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 PNMA1Q8ND90 353 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 VCPKMTQ9H867 229 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 SLC12A7Q9Y666 1083 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 OTOFQ9HC10 1997 aa19.5■□□□□ 0.71
IMP4-202ENST00000409649 IRF6O14896 467 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 DDAH1O94760 285 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 SLC10A3P09131 477 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 CETPP11597 493 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 CPA1P15085 419 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 INHBEP58166 350 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 MTMR2Q13614 643 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 RASAL3Q86YV0 1011 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 REM2Q8IYK8 340 aaPredicted RBP19.49■□□□□ 0.71
IMP4-202ENST00000409649 NKX2-3Q8TAU0 364 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 CHMP4CQ96CF2 233 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 C12orf42Q96LP6 360 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 MAP3K14Q99558 947 aa19.49■□□□□ 0.71
IMP4-202ENST00000409649 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.49■□□□□ 0.71
IMP4-202ENST00000409649 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 A0A1W2PRG0 241 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 MANSC4A6NHS7 340 aaPredicted RBP19.48■□□□□ 0.71
IMP4-202ENST00000409649 EVCP57679 992 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 PPP2R5BQ15173 497 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 CLEC10AQ8IUN9 316 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 PROCA1Q8NCQ7 364 aaPredicted RBP19.48■□□□□ 0.71
IMP4-202ENST00000409649 ACER1Q8TDN7 264 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 BRF1Q92994 677 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 TCEANC2Q96MN5 208 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 LRRC2Q9BYS8 371 aa19.48■□□□□ 0.71
IMP4-202ENST00000409649 A0A0G2JLL6 359 aaPredicted RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 F5H6K3 240 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 HSPA6P17066 643 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 KLRC3Q07444 240 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 NOGQ13253 232 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 PABPC4Q13310 644 aaKnown RBP eCLIP19.47■□□□□ 0.712e-7■■■□□ 18
IMP4-202ENST00000409649 PAXIP1Q6ZW49 1069 aaPredicted RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 PRRT2Q7Z6L0 340 aaPredicted RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 CCDC84Q86UT8 332 aaPredicted RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 ZNF654Q8IZM8 581 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 LRRC47Q8N1G4 583 aaKnown RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 DCAF4Q8WV16 495 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 GMCL1Q96IK5 515 aa19.47■□□□□ 0.71
IMP4-202ENST00000409649 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.47■□□□□ 0.71
IMP4-202ENST00000409649 WDR46O15213 610 aaKnown RBP19.46■□□□□ 0.71
IMP4-202ENST00000409649 KIF5BP33176 963 aa19.46■□□□□ 0.71
IMP4-202ENST00000409649 GPATCH4Q5T3I0 446 aaKnown RBP19.46■□□□□ 0.71
IMP4-202ENST00000409649 SLFN13Q68D06 897 aa19.46■□□□□ 0.71
IMP4-202ENST00000409649 CNKSR2Q8WXI2 1034 aa19.46■□□□□ 0.71
IMP4-202ENST00000409649 ZNF274Q96GC6 653 aaPredicted RBP19.46■□□□□ 0.71
IMP4-202ENST00000409649 KLF18A0A0U1RQI7 1052 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 CCDC196A0A1B0GTZ2 297 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 ZBTB43O43298 467 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 RAD21O60216 631 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 NDUFB10O96000 172 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 SLC1A4P43007 532 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 AK2P54819 239 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 HMGCS2P54868 508 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 SREBF2Q12772 1141 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 COL9A3Q14050 684 aaPredicted RBP19.45■□□□□ 0.7
IMP4-202ENST00000409649 TOB2Q14106 344 aaPredicted RBP19.45■□□□□ 0.7
IMP4-202ENST00000409649 ASPRV1Q53RT3 343 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 APOA5Q6Q788 366 aa19.45■□□□□ 0.7
IMP4-202ENST00000409649 CTCFLQ8NI51 663 aaPredicted RBP19.45■□□□□ 0.7
IMP4-202ENST00000409649 SNHG28P0DPA3 235 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 PDHBP11177 359 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 GJA5P36382 358 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 GNAQP50148 359 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 TROAPQ12815 778 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 ZYXQ15942 572 aaKnown RBP19.44■□□□□ 0.7
IMP4-202ENST00000409649 OTUD7BQ6GQQ9 843 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 CAPNS2Q96L46 248 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 ZSCAN31Q96LW9 406 aaPredicted RBP19.44■□□□□ 0.7
IMP4-202ENST00000409649 GPHNQ9NQX3 736 aaPredicted RBP19.44■□□□□ 0.7
IMP4-202ENST00000409649 EMILIN3Q9NT22 766 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 RBM28Q9NW13 759 aaKnown RBP19.44■□□□□ 0.7
IMP4-202ENST00000409649 LIMCH1Q9UPQ0 1083 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 SLC45A1Q9Y2W3 748 aa19.44■□□□□ 0.7
IMP4-202ENST00000409649 CCL15-CCL14A0A0B4J2E2 113 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 TESPA1A2RU30 521 aaPredicted RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 FAM155AB1AL88 458 aaPredicted RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 DHX16O60231 1041 aaKnown RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 PARP1P09874 1014 aaKnown RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 BMP3P12645 472 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 APOBRQ0VD83 1088 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 CCL15Q16663 113 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 MS4A4AQ96JQ5 239 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 LZTS2Q9BRK4 669 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 ZCCHC17Q9NP64 241 aaKnown RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 NAP1L2Q9ULW6 460 aaPredicted RBP19.43■□□□□ 0.7
IMP4-202ENST00000409649 AGTPBP1Q9UPW5 1226 aa19.43■□□□□ 0.7
IMP4-202ENST00000409649 GOLGA8BA8MQT2 603 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L15C9J2P7 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L13C9JLJ4 530 aa19.42■□□□□ 0.7
IMP4-202ENST00000409649 USP17L11C9JVI0 530 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms