RNA–Protein interactions for RNA: ENST00000409455.5

LIMS2-205, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-205ENST00000409455 FOXP2O15409 715 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 ERCC5P28715 1186 aaPredicted RBP17.48■□□□□ 0.39
LIMS2-205ENST00000409455 PUM3Q15397 648 aaKnown RBP17.48■□□□□ 0.39
LIMS2-205ENST00000409455 ATRIPQ8WXE1 791 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 TAF1LQ8IZX4 1826 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 POLR2DO15514 142 aaKnown RBP17.48■□□□□ 0.39
LIMS2-205ENST00000409455 MFAP3LO75121 409 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 PPFIA4O75335 1185 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 PRR29P0C7W0 189 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 FGFR2P21802 821 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 SARSP49591 514 aaKnown RBP17.48■□□□□ 0.39
LIMS2-205ENST00000409455 SLC27A3Q5K4L6 730 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 TPTE2Q6XPS3 522 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 CNGA4Q8IV77 575 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 EFCAB13Q8IY85 973 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 PROM2Q8N271 834 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 LPIN2Q92539 896 aa17.48■□□□□ 0.39
LIMS2-205ENST00000409455 ABCC12Q96J65 1359 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 LRRIQ3A6PVS8 624 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-205ENST00000409455 RNF40O75150 1001 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 GUCY2CP25092 1073 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 ZAP70P43403 619 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 CTCFLQ8NI51 663 aaPredicted RBP17.47■□□□□ 0.39
LIMS2-205ENST00000409455 AFAP1L1Q8TED9 768 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 PHKBQ93100 1093 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 DEF6Q9H4E7 631 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 VIPAS39Q9H9C1 493 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 TEX33O43247 280 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 MCAMP43121 646 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 SLC9C2Q5TAH2 1124 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 WDR93Q6P2C0 686 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 CDC5LQ99459 802 aaKnown RBP17.47■□□□□ 0.39
LIMS2-205ENST00000409455 MYO1AQ9UBC5 1043 aa17.47■□□□□ 0.39
LIMS2-205ENST00000409455 KANK3Q6NY19 840 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 CCDC148Q8NFR7 591 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 CCDC51Q96ER9 411 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 CTAGE1Q96RT6 745 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 SERTAD1Q9UHV2 236 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 SCN7AQ01118 1682 aa17.46■□□□□ 0.39
LIMS2-205ENST00000409455 RXRAP19793 462 aa17.46■□□□□ 0.38
LIMS2-205ENST00000409455 IARSP41252 1262 aaKnown RBP17.46■□□□□ 0.38
LIMS2-205ENST00000409455 PHKA1P46020 1223 aa17.46■□□□□ 0.38
LIMS2-205ENST00000409455 FILIP1LQ4L180 1135 aa17.46■□□□□ 0.38
LIMS2-205ENST00000409455 DNAJC21Q5F1R6 531 aaKnown RBP17.46■□□□□ 0.38
LIMS2-205ENST00000409455 NLRP3Q96P20 1036 aa17.46■□□□□ 0.38
LIMS2-205ENST00000409455 CHRNDQ07001 517 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 NFIXQ14938 502 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 MAP9Q49MG5 647 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 MICU3Q86XE3 530 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 MED15Q96RN5 788 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 FAM107BQ9H098 131 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 TFRCP02786 760 aaKnown RBP17.45■□□□□ 0.38
LIMS2-205ENST00000409455 ADRA2BP18089 450 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 ATP2B1P20020 1258 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 MCM3P25205 808 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 AARSP49588 968 aaKnown RBP eCLIP17.45■□□□□ 0.38
LIMS2-205ENST00000409455 TXNRD1Q16881 649 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 APOA5Q6Q788 366 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 ANKRD18AQ8IVF6 992 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 NOSTRINQ8IVI9 506 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 STK11IPQ8N1F8 1099 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 NOA1Q8NC60 698 aaKnown RBP17.45■□□□□ 0.38
LIMS2-205ENST00000409455 APPBP2Q92624 585 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 ZNF512BQ96KM6 892 aaPredicted RBP17.45■□□□□ 0.38
LIMS2-205ENST00000409455 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
LIMS2-205ENST00000409455 CASP14P31944 242 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 SPATA1Q5VX52 437 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 GRAMD1CQ8IYS0 662 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 ACRBPQ8NEB7 543 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 CELF1Q92879 486 aaKnown RBP17.44■□□□□ 0.38
LIMS2-205ENST00000409455 MYO6Q9UM54 1294 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 LRP5O75197 1615 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 SYNRGQ9UMZ2 1314 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 ANKRD65E5RJM6 399 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 CPP00450 1065 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 SLC5A1P13866 664 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 RXRBP28702 533 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 CT47A1Q5JQC4 288 aaPredicted RBP17.44■□□□□ 0.38
LIMS2-205ENST00000409455 APTXQ7Z2E3 356 aaKnown RBP17.44■□□□□ 0.38
LIMS2-205ENST00000409455 TMTC1Q8IUR5 882 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 DRC1Q96MC2 740 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 PLEKHA4Q9H4M7 779 aa17.44■□□□□ 0.38
LIMS2-205ENST00000409455 ADD3Q9UEY8 706 aaKnown RBP17.44■□□□□ 0.38
LIMS2-205ENST00000409455 COL4A1P02462 1669 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 SH2B2O14492 632 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 PTPREP23469 700 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 PBX1P40424 430 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 AKAP17AQ02040 695 aaKnown RBP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 SAFBQ15424 915 aaKnown RBP eCLIP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 TADA2BQ86TJ2 420 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 FBXO2Q9UK22 296 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 GPAA1O43292 621 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 ZBTB43O43298 467 aa17.43■□□□□ 0.38
LIMS2-205ENST00000409455 PUS7LQ9H0K6 701 aaKnown RBP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 BSDC1Q9NW68 430 aaPredicted RBP17.43■□□□□ 0.38
LIMS2-205ENST00000409455 GYPCP04921 128 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 GRIN1Q05586 938 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 KLHL10Q6JEL2 608 aa17.42■□□□□ 0.38
LIMS2-205ENST00000409455 NFXL1Q6ZNB6 911 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms