RNA–Protein interactions for RNA: ENST00000407263.2

TSPAN9-202, Transcript of tetraspanin 9, humanhuman

TSL 5 BASIC

Gene TSPAN9, Length 956 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-202ENST00000407263 CHMP4CQ96CF2 233 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 C12orf42Q96LP6 360 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 ARHGAP39Q9C0H5 1083 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 RPAP3Q9H6T3 665 aaPredicted RBP12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 KANSL2Q9H9L4 492 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 ANO2Q9NQ90 1003 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 SLC45A1Q9Y2W3 748 aa12.18□□□□□ -0.46
TSPAN9-202ENST00000407263 B4E1Z4 1266 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 ORC4O43929 436 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 SP3Q02447 781 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 NOM1Q5C9Z4 860 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 CASC1Q6TDU7 716 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 MFSD6Q6ZSS7 791 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 TNS4Q8IZW8 715 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 ANKRD13CQ8N6S4 541 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 NEDD1Q8NHV4 660 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 STAG1Q8WVM7 1258 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 ERO1AQ96HE7 468 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 NUP88Q99567 741 aaPredicted RBP12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 PAGR1Q9BTK6 254 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 VCPKMTQ9H867 229 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 ISY1Q9ULR0 285 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 MTMR7Q9Y216 660 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 TMX2Q9Y320 296 aa12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 RBM8AQ9Y5S9 174 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 ZNFX1Q9P2E3 1918 aaKnown RBP12.17□□□□□ -0.46
TSPAN9-202ENST00000407263 BCRP11274 1271 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 HERVK_113P62684 666 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 C17orf99Q6UX52 265 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 KIAA1211Q6ZU35 1233 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 CTU1Q7Z7A3 348 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 ZKSCAN3Q9BRR0 538 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 LSG1Q9H089 658 aaKnown RBP12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 RNF41Q9H4P4 317 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 GOPCQ9HD26 462 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 MTMR4Q9NYA4 1195 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 CLIP2Q9UDT6 1046 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 CTNNA3Q9UI47 895 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 STX8Q9UNK0 236 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 TRIM17Q9Y577 477 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 TAF6LQ9Y6J9 622 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 U3KPZ7 1027 aaPredicted RBP12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 ZNF236Q9UL36 1845 aa12.16□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L15C9J2P7 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L13C9JLJ4 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L11C9JVI0 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L18D6R9N7 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L22D6RA61 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L17D6RBQ6 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L19D6RCP7 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L20D6RJB6 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 WDR46O15213 610 aaKnown RBP12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 TTLL1O95922 423 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 NDUFB10O96000 172 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 CYP21A2P08686 494 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 CTGFP29279 349 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 HOXA7P31268 230 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 LACTBP83111 547 aaPredicted RBP12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 USP17L24Q0WX57 530 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 FAM83BQ5T0W9 1011 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 LPAR1Q92633 364 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 MCOLN1Q9GZU1 580 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 IL17RBQ9NRM6 502 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 NYAP2Q9P242 653 aa12.15□□□□□ -0.46
TSPAN9-202ENST00000407263 FRMPD3Q5JV73 1810 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 SPDYE16A6NNV3 312 aaPredicted RBP12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 KDM4AO75164 1064 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 FLOT1O75955 427 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 FGRP09769 529 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 KIF22Q14807 665 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 FAM110CQ1W6H9 321 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 CATSPERGQ6ZRH7 1159 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 OTOP1Q7RTM1 612 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 ESR2Q92731 530 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 TXNRD2Q9NNW7 524 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 SMCHD1A6NHR9 2005 aa12.14□□□□□ -0.47
TSPAN9-202ENST00000407263 PCP11498 1178 aaKnown RBP12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 PSMC4P43686 418 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 STOX1Q6ZVD7 989 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 ATG4CQ96DT6 458 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 EFCC1Q9HA90 598 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 FBXO28Q9NVF7 368 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 LCTP09848 1927 aa12.13□□□□□ -0.47
TSPAN9-202ENST00000407263 F5H6K3 240 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 FMNL1O95466 1100 aaPredicted RBP12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 FCGRTP55899 365 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 KLRC3Q07444 240 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 CCDC96Q2M329 555 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 SLFN13Q68D06 897 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 POTEEQ6S8J3 1075 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 MAP4K1Q92918 833 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 TRIM47Q96LD4 638 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 KRT23Q9C075 422 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 MCM3APO60318 1980 aa12.12□□□□□ -0.47
TSPAN9-202ENST00000407263 TNKSO95271 1327 aa12.11□□□□□ -0.47
TSPAN9-202ENST00000407263 MYPNQ86TC9 1320 aa12.11□□□□□ -0.47
TSPAN9-202ENST00000407263 E7EWF7 191 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms