RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 TMCO4Q5TGY1 634 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 CEP104O60308 925 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 XAGE2Q96GT9 111 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 ARHGAP4P98171 946 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 TNNI3KQ59H18 835 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 AMFRQ9UKV5 643 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 FPGT-TNNI3KV9GXZ4 949 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 FANCCQ00597 558 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 PPP2R5EQ16537 467 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 BTG4Q9NY30 223 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 YARSP54577 528 aaKnown RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 NLRP12P59046 1061 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 RAD51AP2Q09MP3 1159 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 TPH2Q8IWU9 490 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 NIM1KQ8IY84 436 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 PALM3A6NDB9 673 aaPredicted RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 STAM2O75886 525 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 CFBP00751 764 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 BSPRYQ5W0U4 402 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 SH3TC1Q8TE82 1336 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 TRIM56Q9BRZ2 755 aaKnown RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 C19orf44Q9H6X5 657 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 HGSO14964 777 aaPredicted RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 GSTA1P08263 222 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 GSTA2P09210 222 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
SMCR8-201ENST00000406438 GRK7Q8WTQ7 553 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 RTEL1Q9NZ71 1219 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 CSADQ9Y600 493 aa13.28□□□□□ -0.28
SMCR8-201ENST00000406438 GNPTABQ3T906 1256 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 KDM2BQ8NHM5 1336 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 NXNQ6DKJ4 435 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 ZNF790Q6PG37 636 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 GOLGA5Q8TBA6 731 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 TBC1D22AQ8WUA7 517 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 UGGT2Q9NYU1 1516 aa13.27□□□□□ -0.28
SMCR8-201ENST00000406438 TROVE2P10155 538 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 AOX1Q06278 1338 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 GOLGA8CPA6NN73 597 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 ABL1P00519 1130 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 TIMM10P62072 90 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 MIS12Q9H081 205 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 DDX21Q9NR30 783 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 H7C1D1 291 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 PDE1CQ14123 709 aaPredicted RBP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 EP400NLQ6ZTU2 488 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 GLG1Q92896 1179 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 ST7Q9NRC1 585 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 PRAG1Q86YV5 1406 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 ATF7P17544 494 aaPredicted RBP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 NONOQ15233 471 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 CCDC38Q502W7 563 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 TYW1Q9NV66 732 aaKnown RBP13.27□□□□□ -0.29
SMCR8-201ENST00000406438 LRWD1Q9UFC0 647 aa13.27□□□□□ -0.29
SMCR8-201ENST00000406438 STAT1P42224 750 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 PDZD4Q76G19 769 aaPredicted RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 PSMB7Q99436 277 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 SLFN12Q8IYM2 578 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 DEPTORQ8TB45 409 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 RGS16O15492 202 aaPredicted RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 KLHL7Q8IXQ5 586 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 MGARPQ8TDB4 240 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 PSPC1Q8WXF1 523 aaKnown RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 LPIN2Q92539 896 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 ESYT2A0FGR8 921 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 DYMQ7RTS9 669 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 PHKBQ93100 1093 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 AS3MTQ9HBK9 375 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 RIC8AQ9NPQ8 531 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 BAG5Q9UL15 447 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 EYA2O00167 538 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 MCTP2Q6DN12 878 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 SKA2Q8WVK7 121 aaPredicted RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 RBBP5Q15291 538 aaKnown RBP13.26□□□□□ -0.29
SMCR8-201ENST00000406438 TYW1BQ6NUM6 668 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 SDCCAG3Q96C92 435 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 VPS37BQ9H9H4 285 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 ITKQ08881 620 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 TNFAIP1Q13829 316 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 C2CD5Q86YS7 1000 aa13.26□□□□□ -0.29
SMCR8-201ENST00000406438 ZMYM4Q5VZL5 1548 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 C4orf50Q6ZRC1 276 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 IP6K1Q92551 441 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 CCDC68Q9H2F9 335 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 ARHGAP6O43182 974 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 RINT1Q6NUQ1 792 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 SPATA5Q8NB90 893 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 CABS1Q96KC9 395 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 DDX41Q9UJV9 622 aaKnown RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
SMCR8-201ENST00000406438 ARHGAP44Q17R89 818 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 SCYL1Q96KG9 808 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 MMS19Q96T76 1030 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 PPME1Q9Y570 386 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 PCDHB13Q9Y5F0 798 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 GCP02774 474 aa13.25□□□□□ -0.29
SMCR8-201ENST00000406438 LMNB1P20700 586 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms