RNA–Protein interactions for RNA: ENST00000405655.7

PRAME-205, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-205ENST00000405655 TDRD3Q9H7E2 651 aaKnown RBP16.21■□□□□ 0.19
PRAME-205ENST00000405655 CBX8Q9HC52 389 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 RBM28Q9NW13 759 aaKnown RBP16.21■□□□□ 0.19
PRAME-205ENST00000405655 ZBTB12Q9Y330 459 aaPredicted RBP16.21■□□□□ 0.19
PRAME-205ENST00000405655 FOXN1O15353 648 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 RCAN1P53805 252 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 SAFBQ15424 915 aaKnown RBP eCLIP16.21■□□□□ 0.19
PRAME-205ENST00000405655 DGKHQ86XP1 1220 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 DNAJC18Q9H819 358 aa16.21■□□□□ 0.19
PRAME-205ENST00000405655 SIPA1L1O43166 1804 aa16.21■□□□□ 0.18
PRAME-205ENST00000405655 KINO60870 393 aaKnown RBP16.2■□□□□ 0.18
PRAME-205ENST00000405655 GABPAQ06546 454 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 ZNF174Q15697 407 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 HOMER1Q86YM7 354 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 FBXO41Q8TF61 875 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 PDLIM2Q96JY6 352 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 OSBPL5Q9H0X9 879 aaPredicted RBP16.2■□□□□ 0.18
PRAME-205ENST00000405655 FAM198AQ9UFP1 575 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 ZNF202O95125 648 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 CALM1P0DP23 149 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 CALM2P0DP24 149 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 CALM3P0DP25 149 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 SCG2P13521 617 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 SHMT1P34896 483 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 ATP2B2Q01814 1243 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 GRM4Q14833 912 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 KLHL34Q8N239 644 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 NEDD1Q8NHV4 660 aa16.2■□□□□ 0.18
PRAME-205ENST00000405655 PRMT6Q96LA8 375 aaPredicted RBP16.2■□□□□ 0.18
PRAME-205ENST00000405655 ZNF830Q96NB3 372 aaPredicted RBP16.2■□□□□ 0.18
PRAME-205ENST00000405655 FOXP1Q9H334 677 aaPredicted RBP16.2■□□□□ 0.18
PRAME-205ENST00000405655 SHTN1A0MZ66 631 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 MPHOSPH10O00566 681 aaKnown RBP16.19■□□□□ 0.18
PRAME-205ENST00000405655 KRT2P35908 639 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 KIAA2012Q0VF49 1180 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 STRIP1Q5VSL9 837 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 SDF4Q9BRK5 362 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 ADCY5O95622 1261 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 NLRP5P59047 1200 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 TMED8Q6PL24 325 aaPredicted RBP16.19■□□□□ 0.18
PRAME-205ENST00000405655 PIK3AP1Q6ZUJ8 805 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 TTLL6Q8N841 843 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 ANKS1AQ92625 1134 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 ANP32BQ92688 251 aaKnown RBP16.19■□□□□ 0.18
PRAME-205ENST00000405655 TNFRSF25Q93038 417 aa16.19■□□□□ 0.18
PRAME-205ENST00000405655 A0A1W2PQ27 194 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 A0A1W2PQ64 194 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 A0A1W2PQD8 194 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 KLRF2D3W0D1 207 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 JAG1P78504 1218 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 PFKFB3Q16875 520 aaPredicted RBP16.18■□□□□ 0.18
PRAME-205ENST00000405655 WWC2Q6AWC2 1192 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 SASS6Q6UVJ0 657 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 HHIPL2Q6UWX4 724 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 GRAMD1CQ8IYS0 662 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 TCP11L1Q9NUJ3 509 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 CLIP2Q9UDT6 1046 aa16.18■□□□□ 0.18
PRAME-205ENST00000405655 CLRN2A0PK11 232 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 PALM3A6NDB9 673 aaPredicted RBP16.17■□□□□ 0.18
PRAME-205ENST00000405655 LONRF3Q496Y0 759 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 HEATR3Q7Z4Q2 680 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 ZSCAN29Q8IWY8 852 aaPredicted RBP16.17■□□□□ 0.18
PRAME-205ENST00000405655 CDAN1Q8IWY9 1227 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 PDILTQ8N807 584 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 TRIM44Q96DX7 344 aaPredicted RBP16.17■□□□□ 0.18
PRAME-205ENST00000405655 ZDHHC15Q96MV8 337 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 GPCPD1Q9NPB8 672 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 SERPINB13Q9UIV8 391 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 FBXO2Q9UK22 296 aaPredicted RBP16.17■□□□□ 0.18
PRAME-205ENST00000405655 MYH4Q9Y623 1939 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 C10orf71Q711Q0 1435 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 RAD21O60216 631 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 CMA1P23946 247 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 PNOCQ13519 176 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 TTBK2Q6IQ55 1244 aa16.17■□□□□ 0.18
PRAME-205ENST00000405655 PSMD14O00487 310 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 RRP1BQ14684 758 aaKnown RBP16.16■□□□□ 0.18
PRAME-205ENST00000405655 PPP2R5BQ15173 497 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 CFAP100Q494V2 611 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 PIGSQ96S52 555 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 MTMR4Q9NYA4 1195 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 SUGT1Q9Y2Z0 365 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 IGSF3O75054 1194 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 PPP6R2O75170 966 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 GDF11O95390 407 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 KIF5BP33176 963 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 SLC16A2P36021 539 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 RESP18Q5W5W9 173 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 EPSTI1Q96J88 318 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 CSRNP2Q9H175 543 aa16.16■□□□□ 0.18
PRAME-205ENST00000405655 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.16■□□□□ 0.18
PRAME-205ENST00000405655 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.16■□□□□ 0.18
PRAME-205ENST00000405655 A0A087X0B3 334 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 SYKP43405 635 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 ZNF165P49910 485 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 LARGE2Q8N3Y3 721 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 SPC24Q8NBT2 197 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 FAM200AQ8TCP9 573 aa16.15■□□□□ 0.18
PRAME-205ENST00000405655 TCP10L2B9ZVM9 353 aa16.14■□□□□ 0.17
PRAME-205ENST00000405655 PARP1P09874 1014 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms